Gene TM1040_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2960 
SymbolflgG 
ID4077111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3129230 
End bp3130015 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content58% 
IMG OID638008289 
Productflagellar basal body rod protein FlgG 
Protein accessionYP_614954 
Protein GI99082800 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.671513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.156049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAC TTAAAATTGC CGCCACGGGG ATGAGCGCGC AGCAACTGCG TGTTGAAACG 
ATCTCCAACA ACCTGGCCAA TATGAACACC ACCGCCTACA ACGCGCGCCG CGCGGAATTT
GCGGACCTGC ACTATCAGCA GATCTCCCGT GCCGGGACGG TAAATGCCTC CGATGGCACT
GTGCTGCCCA CGGGGGTTCA GGTTGGCCTC GGCGTCCGGC CGGCTGCGGT TTCTGTTTAC
CTCAATCAAG GTGCGCTGTC GCAAACCGGC AATGAACTCG ATCTCGCGAT TGATGGAAAC
GGCTACTTCG AGGTGACGCT GCCCTCTGGC GAAACCGCCT ACACCCGTGA CGGGTCTTTC
AAACGCTCTG CCGAAGGGTT GATCGTTACC AATGATGGCT ACCCGGTCTC ACCGGAAATC
ACCGTTCCTG AGGATGCTAA ATCCATCTCC ATCAACGGCG AGGGCGAGGT CTACGCATAT
TTCAACGACA CCATCGAAGC GGAGCTTCTG GGCCAGTTCA CCCTCTCTGG TTTCACCAAT
CCCAAGGGAC TTGAGGCGAT GGGGGGCAAC CTCTTCAAGC AGACCGAGGC CTCCGGCCAG
CCCAACACCA CCGAACCTGG TGCTGATGGG ATCGGTTTCC TGCGCCAGAA ATACTTGGAA
GACAGCTCGG TTGATGCCGT GCGCGAGATC ACCGAACTGA TCGAAGCCCA GCGCGGATAC
GAGATGAACT CCAAGGTGAT CTCCGCTGTC GATCAGATGA TGTCGGCAAC CACACAGGTG
CGCTAA
 
Protein sequence
MRALKIAATG MSAQQLRVET ISNNLANMNT TAYNARRAEF ADLHYQQISR AGTVNASDGT 
VLPTGVQVGL GVRPAAVSVY LNQGALSQTG NELDLAIDGN GYFEVTLPSG ETAYTRDGSF
KRSAEGLIVT NDGYPVSPEI TVPEDAKSIS INGEGEVYAY FNDTIEAELL GQFTLSGFTN
PKGLEAMGGN LFKQTEASGQ PNTTEPGADG IGFLRQKYLE DSSVDAVREI TELIEAQRGY
EMNSKVISAV DQMMSATTQV R