| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2953 |
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| Symbol | flhA |
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| ID | 4077104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3122923 |
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| End bp | 3125013 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008282 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_614947 |
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| Protein GI | 99082793 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.134451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGAATC TGTCAGTCAA AGAGCTCTTT AGTCCGACCA TCCTTTTGGC GATGGCGCTG
ATGGCGATTA TCGTGATGAT GATCCTTCCG ATGCCTGCTT GGGTGTTGGA TGTGGGTCTT
GCAACTTCGT TTGCGCTCGC CATCCTTATC TTCACCATCA CCTTGTTCAT TGAACGGCCA
CTGGATTTTT CATCCTTTCC AACGATCCTG CTTGGTTCGC TCATGCTGCG TTTGTCTCTC
AACGTGTCTT CGACCAAGCT TATTATCGGG CAGGGGCACA CCGGCACTGA TGCGGCAGGG
AACGTGATTG AGGGCTTTGC CAATTTTGTG ATGGGAGGCA GTGTATTCCT CGGCCTAGTG
GTCTTTGGGG TGCTGCTCAT CGTGAACTTC ATGGTGATCA CCAAAGGTGC CGCACGGATG
GCAGAGGTTG GCGCGCGTTT TGCCCTTGAT GGGATGCCGG GCAAACAGCT CGCGATCGAC
AGCGATATGT CAGCTGGTGC GATTGATCAT GCAACAGCCA AGGAACGGCG CGAAACAGAA
CAGCGGGAAA CCACCTTCTT TGGCTCCTTG GATGGTGCCT CGAAGTTTGT GAAAGGGGAT
GCCATCGCGG GCCTTCTCAT CACGCTTCTC AATCTGATCA TGGGTCTGAT CATGGGAATC
TTGATCCATG GGATGCCTGT CGCCACTGCA TTTGAAACCT ACGCGATCCT GACGGTGGGG
GATGGCCTGG TATCGCAGAT CCCCTCAGTC ATCATCTCCA TCGCGGCCGC TCTTTTGCTC
GCGCGCGGCG GGGCGTCCGG CTCGACAGAC ACCGCGATTT TCTCTCAGTT CTCCAAATAT
CCCGGGGCAA TTGGGGCCGT TGCGGTCCTG ATGGTGCTCT TCGCGCTGGT GCCCGGCCTC
CCCTTCGTAC CATTTATCGC GGGTGGAGGC GCGCTGGGCT ATCTCGCGTA TCGCGTCAAG
ACAAACAACG ACGCAGCCGC CCAGGAAGAG ATCGACGCCA AGGTTGAGGA AGTGCAATCG
CCCGAAAAAA CCAAGGCCCT GGGAGACATC CTCGACCTTG ACGATCTGCA TCTTGAGTTC
TCTCAGGACC TTGTTTCAAT GGTGCTGGAT CCCGGCACCG GGCTTGATGC CCGTATCGCG
AATATGCGCA CCCATGTGGC GACAACCTTC GGGCTGATCC TGCCGGAGAT CCGGCTCACG
GATGAGGCTG AGCTCGAGAA TGGCACCTAT GTGGTGCGTA TTCAGGGGGT CGAGCAGGCG
CGTGGTACGC TTCACCCGGA CATGGTGTTG GCGCTTATGC CCGACAATCA CGCGGCATTG
CCCTCTGGCA CCGATGTGAC GGAACCTGTT TACGGTGCGC CAGCGCGCTG GATTGCTACC
AAACATCAGG AAGATGCTGC GCTGATGGGG GCGACGGTTG TATCGCCGCC GGAAATTCTT
GCGACGCACC TCCTGGAGGT CGTGAAGCAG AGCTTCCCGC GTCTGCTGAC GTTGAAGGCT
CTGCGGCGCC TGCTGCGTGA AATGACCGAG CTAAGTGATG AATTCCGCGC CAATGCCAAC
AAGAAGCTTC TGGATGAACT GATCCCAGAT AAGGTGCCGA TTGATACGCT CCATGCGGTT
CTTCGCCTGC TCTTGGAGGA GCGAGTATCG ATCCGGAACA TGCCTTTGAT CCTCGAGTCC
ATCGCCGAAG CCCGGATGCG AACAACCTCG CCTGAACTGA TCACAGAACA TGTTCGACAG
CGCCTCGGAT TCCAGCTCGT TGCAGAGATG AAGCGCGAAG ACGGAACCAT CCCGCTGGTT
CAGCTCGCCC CGGAATGGGA AGATGCCTTT ACCACCTATC AGGTGGAGAC CCAATCTGGC
CTCGATATCG CGCTGCCGCC TGACACCTTC AACAAGCTTG TCGATGCAAT GAGCGAAAAG
ATCAATCAGG TCACCGAACA GGGGATTTTT GCTGCGATCG TCACCTCGAC GCGTCGGCGC
CGGTATTTGC GCACTATCCT GCGCTCGCGC GGTATCCAGA ACCCGGTTTT GTCGTTCGAA
GAGATTGGTC TGGAGGCGCG CCCTGCATTG GTGGGCATGG TCGCGGCATG A
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| Protein sequence | MPNLSVKELF SPTILLAMAL MAIIVMMILP MPAWVLDVGL ATSFALAILI FTITLFIERP
LDFSSFPTIL LGSLMLRLSL NVSSTKLIIG QGHTGTDAAG NVIEGFANFV MGGSVFLGLV
VFGVLLIVNF MVITKGAARM AEVGARFALD GMPGKQLAID SDMSAGAIDH ATAKERRETE
QRETTFFGSL DGASKFVKGD AIAGLLITLL NLIMGLIMGI LIHGMPVATA FETYAILTVG
DGLVSQIPSV IISIAAALLL ARGGASGSTD TAIFSQFSKY PGAIGAVAVL MVLFALVPGL
PFVPFIAGGG ALGYLAYRVK TNNDAAAQEE IDAKVEEVQS PEKTKALGDI LDLDDLHLEF
SQDLVSMVLD PGTGLDARIA NMRTHVATTF GLILPEIRLT DEAELENGTY VVRIQGVEQA
RGTLHPDMVL ALMPDNHAAL PSGTDVTEPV YGAPARWIAT KHQEDAALMG ATVVSPPEIL
ATHLLEVVKQ SFPRLLTLKA LRRLLREMTE LSDEFRANAN KKLLDELIPD KVPIDTLHAV
LRLLLEERVS IRNMPLILES IAEARMRTTS PELITEHVRQ RLGFQLVAEM KREDGTIPLV
QLAPEWEDAF TTYQVETQSG LDIALPPDTF NKLVDAMSEK INQVTEQGIF AAIVTSTRRR
RYLRTILRSR GIQNPVLSFE EIGLEARPAL VGMVAA
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