Gene TM1040_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2950 
Symbol 
ID4077101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3118616 
End bp3119233 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content58% 
IMG OID638008279 
Producthypothetical protein 
Protein accessionYP_614944 
Protein GI99082790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.283763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGG CGAACAAGTC TCAAAAGATG GAAAAAGCGC GGCGCGGCAC TTTGATGCTG 
TTGGCTGTTT TCCTGATGGG CTCTGCGGTG GTGCGAATCG CACTCGAAGC GGCTCCGGCG
ATTGCGCGGG AGGTTGCAGA TATCAAATCG GATGAAGCGC CTGTCGAAAA ACCGGTGGCT
GCGACGGGTC TCGCTTCGGT GCCCGATTCC GCAGAGATGC AAGCCATGCT TGCTGCGTTC
CAAAAGCGCG AAGAAAAACT GGCGGCTCGT GAAGCTGAGG TGGAAGATCG GATGCGGGCC
CTGGAGATCG CCGATCAGGC CATCGATAAA AAGCTGCAGG ATCTTGAGGA GGCTGAGCAA
AAGTTGCTGG CCACTCTGGC GCTGGCTGAC GGCGCTGCCG AGCAGGACGT CACCACGCTG
ACAACAGTCT ATGAACAGAT GAAGCCTAAG GATGCTTCTG CTCTGTTTGA AGAAATGGAC
CCTACGTTTG CAGCCGGGTT TCTTGCACGC ATGAAACCGG AAGCCGCGGC GGGTATCATG
GCAGGGCTGA GCCCCGAGGC TGCATACACG ATCAGTGTCG TGCTTGCGGG ACGCAACGGC
GAGGTGCCCA AGGAGTAA
 
Protein sequence
MAKANKSQKM EKARRGTLML LAVFLMGSAV VRIALEAAPA IAREVADIKS DEAPVEKPVA 
ATGLASVPDS AEMQAMLAAF QKREEKLAAR EAEVEDRMRA LEIADQAIDK KLQDLEEAEQ
KLLATLALAD GAAEQDVTTL TTVYEQMKPK DASALFEEMD PTFAAGFLAR MKPEAAAGIM
AGLSPEAAYT ISVVLAGRNG EVPKE