Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2950 |
Symbol | |
ID | 4077101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3118616 |
End bp | 3119233 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638008279 |
Product | hypothetical protein |
Protein accession | YP_614944 |
Protein GI | 99082790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.283763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGG CGAACAAGTC TCAAAAGATG GAAAAAGCGC GGCGCGGCAC TTTGATGCTG TTGGCTGTTT TCCTGATGGG CTCTGCGGTG GTGCGAATCG CACTCGAAGC GGCTCCGGCG ATTGCGCGGG AGGTTGCAGA TATCAAATCG GATGAAGCGC CTGTCGAAAA ACCGGTGGCT GCGACGGGTC TCGCTTCGGT GCCCGATTCC GCAGAGATGC AAGCCATGCT TGCTGCGTTC CAAAAGCGCG AAGAAAAACT GGCGGCTCGT GAAGCTGAGG TGGAAGATCG GATGCGGGCC CTGGAGATCG CCGATCAGGC CATCGATAAA AAGCTGCAGG ATCTTGAGGA GGCTGAGCAA AAGTTGCTGG CCACTCTGGC GCTGGCTGAC GGCGCTGCCG AGCAGGACGT CACCACGCTG ACAACAGTCT ATGAACAGAT GAAGCCTAAG GATGCTTCTG CTCTGTTTGA AGAAATGGAC CCTACGTTTG CAGCCGGGTT TCTTGCACGC ATGAAACCGG AAGCCGCGGC GGGTATCATG GCAGGGCTGA GCCCCGAGGC TGCATACACG ATCAGTGTCG TGCTTGCGGG ACGCAACGGC GAGGTGCCCA AGGAGTAA
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Protein sequence | MAKANKSQKM EKARRGTLML LAVFLMGSAV VRIALEAAPA IAREVADIKS DEAPVEKPVA ATGLASVPDS AEMQAMLAAF QKREEKLAAR EAEVEDRMRA LEIADQAIDK KLQDLEEAEQ KLLATLALAD GAAEQDVTTL TTVYEQMKPK DASALFEEMD PTFAAGFLAR MKPEAAAGIM AGLSPEAAYT ISVVLAGRNG EVPKE
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