| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2926 |
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| Symbol | |
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| ID | 4078604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3096162 |
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| End bp | 3097028 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008255 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_614920 |
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| Protein GI | 99082766 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.458427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.684158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAT ATGATGATCG CGACGGTCTG ATCTGGATGG ATGGCGAACT GGTGAATTGG
CGCGATGCCA AGGTTCACAT CCTGACTCAT GCGATGCATT ACGCGTCTTC CGTTTTTGAG
GGCGAGCGCG CTTATAACGG CAAGATCTTT AAAAGCCGCG CCCATTCCGA ACGACTGATT
GCATCGGCAG AGGCACTGGA CATGCCGATG CCCTACTCGG TCGATGACAT CGAACGCGCC
AAAGAAGAAA CCCTCAAAGC CTCCGGGCTG CAGGATGCGT ATGTGCGTGC GGTGGTGTGG
CGCGGCTCTG GCGAAGACAT GGGGGTCGCC TCGGCGAAAA ACCCTGTGAG AATGGCCGTC
GCGGTATGGG GCTGGGGTGC CTATTACGGC GATGCCAAAA TGCAGGGCGC GAAACTCGAC
ATCGCAGAGT TCAAACGTCC CTCGCCGGAA ACGATCCCCG TGCATGCGAA GGCGGCAGGC
CTCTACATGA TCTGCACCAT CTCCAAGCAC AAGGCCGAAG CCAAGGGCTG CTCTGATGCC
TTGTTCATGG ATTACCGTGG CTATGTGGCC GAAGCCACCG GCGCAAATAT CTTCTTCGTA
AAAGACGGCG AGGTGCATAC GCCCAAACCT GATTGCTTCC TCAACGGTAT TACCCGTCAA
ACGGTGATCC AGATGCTCAA AGACAAAGGC ATCACCGTGC ATGAACGTCA TATCATGCCC
GAGGAAATGG ATGGGTTTGA GCAATGCTGG CTGACAGGCA CCGCCGCCGA AGTGACCCCC
GTCGGCGAGA TCGGGCCTTA CAAATTCGAA GTGGGTCAGC TCACACGCGA AATCGCCGAA
GAATACGAGG CCCTAGTGCG CAGCTAA
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| Protein sequence | MAGYDDRDGL IWMDGELVNW RDAKVHILTH AMHYASSVFE GERAYNGKIF KSRAHSERLI
ASAEALDMPM PYSVDDIERA KEETLKASGL QDAYVRAVVW RGSGEDMGVA SAKNPVRMAV
AVWGWGAYYG DAKMQGAKLD IAEFKRPSPE TIPVHAKAAG LYMICTISKH KAEAKGCSDA
LFMDYRGYVA EATGANIFFV KDGEVHTPKP DCFLNGITRQ TVIQMLKDKG ITVHERHIMP
EEMDGFEQCW LTGTAAEVTP VGEIGPYKFE VGQLTREIAE EYEALVRS
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