| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2921 |
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| Symbol | |
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| ID | 4078599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3092630 |
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| End bp | 3093493 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008250 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_614915 |
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| Protein GI | 99082761 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.766951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAG GGTTTACCGC TGCGCTCTTG CAGGCGCAGA CGCAGATCTT AAACCATATG
GACCGTCGCC TGCCGCAGGC GGACCTGTTG CATCAGGCAA TGGATTACGC CTTGCGGGGC
GGCAAGATGC TTCGGGGGTT CCTCGTTCTG GAGAGCGCGC GTTTGCATGA CGTGCCTGAA
ACGGCTGCGA TCGAAGCGGC ACTCGCGATT GAGTGCATTC ATGCCTACTC GCTTGTGCAT
GACGACCTGC CTGCGATGGA TGACGATGAT CTGCGCCGAG GCCAGCCGAC GCTGCATCGC
AAATGGGACG AGGCCACCGC CGTGCTTGCC GGGGACAGCC TGCAAACATT GGCGTTTGAA
CTGCTCGCTC GCGACAGCGT TGGACCCAAT GCGCTCAGCC TCATCCGCAC CCTTGCCCAA
GCGGCGGGCA AGGACGGAAT GGTCTCTGGT CAGATGATGG ACATCGCGGC TGAAACGGCA
GAAACCCCGC TGACGCTTGA TGAAATCACG ACCCTCCAGG CCCGCAAGAC AGGCTGTTTG
ATCGAATGGT CCGCATGTGC CGGAGCGCGG CTTGCCGGGG CAGATCCGGC GCCACTGCGT
CACTATGCCC AAGCACTTGG GCTGGCTTTT CAGATCGCGG ACGACATCTT AGATGTAGAA
GGCGATGCAG CGACCGTCGG CAAAGCTGTG CGCAAAGATG CTGATGCGGG CAAAGCCACA
TTCGTGTCGC ATCTTGGGCT TGAAGGCGCA AAACACCGCG CTCGAGAGTT GGCTGACCTA
GCCTGCGCAG CCCTTGCCCC CTATGGCGCG GCAGGCGACA CCTTGAAGGA CGCCGCCCGC
TTCGTTATCT CGCGCGACAG CTAA
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| Protein sequence | MTAGFTAALL QAQTQILNHM DRRLPQADLL HQAMDYALRG GKMLRGFLVL ESARLHDVPE
TAAIEAALAI ECIHAYSLVH DDLPAMDDDD LRRGQPTLHR KWDEATAVLA GDSLQTLAFE
LLARDSVGPN ALSLIRTLAQ AAGKDGMVSG QMMDIAAETA ETPLTLDEIT TLQARKTGCL
IEWSACAGAR LAGADPAPLR HYAQALGLAF QIADDILDVE GDAATVGKAV RKDADAGKAT
FVSHLGLEGA KHRARELADL ACAALAPYGA AGDTLKDAAR FVISRDS
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