| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2912 |
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| Symbol | infB |
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| ID | 4078590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3079475 |
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| End bp | 3081982 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008241 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_614906 |
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| Protein GI | 99082752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.922149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA GTGACGGCAA AAAGACATTG GGTCTTCGTG GTAGCGGGTC TCGGCCCGGC
AATGTGAAAC AGAGCTTCAG CCACGGTCGG ACCAAGAATG TTGTGGTGGA AACCAAGCGC
AAGCGCGTGG TTGTCCCCAA GCCGGGCGCA GGCAAAGGCG GCGCCGGTGG CGTTGCTGCC
GGCGATGCTT CGCGGCGCCC TGCTGGTATT TCTGATGCGG AAATGGACCG CCGCCTGAAG
GCGCTTCAGG CAGCCAAGGC CCGTGAGGCC GAAGAGGCCG CCCAGCGTGA GGCCGAGGAA
AAAGCCCGCG CCGAAGAGCG TGAGCGCCGC CGTGCCGAAC AAGAGGCCAA GGAGCGTGAA
CAGCGCGAGG CCGAAGAAAA GGCACGTCAA AAGGCCGAAG AAGAAGAGCG CAAGCGCCAG
GAAGAAGCAG AAGCCGCCAA GAAGCGCGCC GCTGCTGACA AGGCCGCTGC TGCCGCACCC
AAGTCTGACG CAGGCGTTGC GCCTGCGCGT CCGGCTCCTG GTGGGGCGCC GAAACCTGCC
GCTGGCCCGC GCAAGGCCGA GCGTGAACGC GAAGAGCGCG GTCGTGGTGC CAAGGGCCGC
AATGATGGTG GTCGCCGCTC CGGCAAACTG ACCCTGAGCC AGGCCACCGG TGGCGAAGGC
GGGCGTCAGC GCTCTGTCGC GTCCATGAAG CGCAAGCAAG AGCGTGCGCG TCAAAAAGCC
ATGGGTCAGG TCGAACGCGA AAAGATCATT CGTGACGTCC AGCTGCCCGA AGCCATCGTG
GTGTCGGAGC TGGCCAACCG TATGGCAGAA CGTGTGGCTG ACGTTGTGAA GGCGCTCATG
AACATGGGCA TGATGGTGAC GCAGAATCAG ACCATCGATG CCGATACCGC GGAACTCATC
ATCGAAGAAT TCGGCCACAA CGTGGTGCGT GTTTCCGATG CGGACGTCGA GGACGTCATC
AAGGAAATCG AAGACAAAGA AGAAGATCTG CAGCCGCGTC CGCCAGTCAT TACCATCATG
GGTCACGTTG ACCATGGGAA GACCTCGCTT CTGGATGCGA TTCGCGACGC CAAGGTTGTC
GCCGGCGAAG CGGGCGGGAT CACCCAGCAT ATCGGTGCTT ACCAGGTGAC GACCGATAGC
GGTGCGGTTC TGTCGTTCCT CGACACGCCC GGCCACGCGG CCTTCACCTC GATGCGCTCT
CGTGGTGCTC AGGTAACCGA CATTGTGGTG CTGGTCGTTG CCGCAGACGA TTCGGTGATG
CCGCAGACTG TCGAGGCGAT CAACCACGCC AAGGCGGCGG GTGTGCCGAT GATTGTTGCG
ATCAACAAGA TCGACAAACC TGCTGCTGAC CCGAACAAGG TGCGCGCAGA ATTGCTGCAG
CACGAGGTTA TCGTCGAAGC GATGTCTGGT GAAGTTCAGG ACGTCGAAGT CTCTGCCCAC
ACGGGCCAGG GTCTGGATGA ACTGCTTGAA GCTATCGCGC TGCAGGCGGA AATCCTCGAA
CTGAAAGCCA ACCCGAACCG TGCAGCCCAA GGTGCTGTGA TCGAAGCACA GCTCGACGTG
GGTCGCGGTC CGGTCGCAAC GGTTCTGGTT CAGACCGGCA CGCTGCGTCA GGGCGACATC
TTTGTTGTCG GTGAGCAGTA CGGTAAAGTC CGTGCGCTGA TCAACGACAA GGGCGAGCGC
GTCAAAGAAG CTGGTCCGTC GGTTCCGGTC GAGGTTCTGG GTCTCAATGG CACGCCAGAG
GCAGGTGACG TTCTCAACGT CACGGAAACC GAAGCACAGG CCCGTGAGAT CGCAGAATAC
CGCGAGCAAG CTGCCAAGGA TAAGCGTGCC GCTGCGGGTG CCGCCACCAC GCTCGAACAG
CTTATGCAGA AGGCCAAAGA AGACGAAAAC GTCTCCGAGC TGCCGATCCT CGTCAAAGCG
GACGTGCAGG GCTCTGCCGA AGCGATCGTT CAGGCGATGG AAAAGATCGG CAACGACGAG
GTGCGCGTGC GCGTGCTGCA CTCCGGTGTG GGCGCGATCA CCGAAACCGA CATTGGTCTG
GCAGAAGCGT CGGGTGCTCC GGTCATGGGC TTCAACGTCC GTGCGAATGC TTCCGCGCGC
AACACTGCCA ACCAAAAAGG CGTGGAGATC CGCTACTACT CGGTGATCTA CGACCTCGTG
GATGACGTGA AAGCTGCGGC CTCGGGTCTG CTCTCGGCAG AGATCAAAGA GAACTTCATC
GGTTACGCGG AAATCAAGGA CGTGTTCAAA GTGTCCAACG TCGGCAAGGT CGCTGGCTGT
CTGGTCACCG AAGGTGTGGC GCGCCGCTCT GCCGGTGTGC GTCTGCTGCG CGATAACGTG
GTGATCCACG AAGGTACGCT GAAGACTCTC AAGCGCTTTA AGGACGAAGT TGCTGAGGTT
CAATCTGGTC AGGAATGCGG TATGGCGTTT GAGAACTACG ACGATATCCG GCCCAAGGAT
GTCATCGAGA TCTTTGAGCG CGAGGAAGTC ACCCGCACAC TCGACTGA
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| Protein sequence | MSDSDGKKTL GLRGSGSRPG NVKQSFSHGR TKNVVVETKR KRVVVPKPGA GKGGAGGVAA
GDASRRPAGI SDAEMDRRLK ALQAAKAREA EEAAQREAEE KARAEERERR RAEQEAKERE
QREAEEKARQ KAEEEERKRQ EEAEAAKKRA AADKAAAAAP KSDAGVAPAR PAPGGAPKPA
AGPRKAERER EERGRGAKGR NDGGRRSGKL TLSQATGGEG GRQRSVASMK RKQERARQKA
MGQVEREKII RDVQLPEAIV VSELANRMAE RVADVVKALM NMGMMVTQNQ TIDADTAELI
IEEFGHNVVR VSDADVEDVI KEIEDKEEDL QPRPPVITIM GHVDHGKTSL LDAIRDAKVV
AGEAGGITQH IGAYQVTTDS GAVLSFLDTP GHAAFTSMRS RGAQVTDIVV LVVAADDSVM
PQTVEAINHA KAAGVPMIVA INKIDKPAAD PNKVRAELLQ HEVIVEAMSG EVQDVEVSAH
TGQGLDELLE AIALQAEILE LKANPNRAAQ GAVIEAQLDV GRGPVATVLV QTGTLRQGDI
FVVGEQYGKV RALINDKGER VKEAGPSVPV EVLGLNGTPE AGDVLNVTET EAQAREIAEY
REQAAKDKRA AAGAATTLEQ LMQKAKEDEN VSELPILVKA DVQGSAEAIV QAMEKIGNDE
VRVRVLHSGV GAITETDIGL AEASGAPVMG FNVRANASAR NTANQKGVEI RYYSVIYDLV
DDVKAAASGL LSAEIKENFI GYAEIKDVFK VSNVGKVAGC LVTEGVARRS AGVRLLRDNV
VIHEGTLKTL KRFKDEVAEV QSGQECGMAF ENYDDIRPKD VIEIFEREEV TRTLD
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