| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2885 |
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| Symbol | |
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| ID | 4076419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3054365 |
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| End bp | 3055591 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008214 |
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| Product | threonine dehydratase |
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| Protein accession | YP_614879 |
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| Protein GI | 99082725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR02079] threonine dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.134652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACT TCAGAACCCA GGCCAAAGCG GCCGAGGCGG CGATGCGCGA TGTCTTCCCG
CCCACGCCGC TGCAACGCAA CGAACTCCTG TCGCAGCGCT TTGGTGCGGA GATTTACCTC
AAACGCGAGG ATCTCAGCCC GGTGCGCTCC TACAAGATTC GCGGCGCGCT CAACGCGATG
CGAAAGCAGA CCAGCAAGGA TCTGTTTGTC TGTGCTTCGG CGGGAAATCA CGCGCAGGGC
ATGGCTTACA TGTGTCGGCA AATGGACAAA CGGGGTGTGA TCTTTATGCC GGTGACCACA
CCTCAGCAGA AGATCCAGAA GACCCGCATG TTTGGCGGTG ACAACGTCGA GGTGCATCTG
ATCGGGGATT ACTTCGACGA TACATTGTCC GCCGCGCAGG CGTGGTGCGC AGAAAAAGGA
GGGTATTTCC TCTCTCCTTT TGACGACGCG GATGTCATCG AAGGTCAGGC ATCAATCGCA
GTGGAAATCG AGGCGCAACT CGGCAAGGCG CCGGATCATA TCGTTCTACC GGTGGGCGGC
GGGGGTATGT CCTCTGGCGT GGTTCGGTAT TTTGGCGAGG ATGTGCATGC GCTTCTTGTG
GAGCCTGAGG GCGGCGCCTG CCTGAAGGCG GCGCTTGAGG CAGGTCATCC CACACCGCTC
AACCGGGTGG ATACCTTTGT GGACGGCGCC GCCGTTGGCA AAATTGGCGA GCGGCCTTTT
GATATTTTGC GCAGCGTGCC GTTGCCGGAT GTCCTGACTG TGTCAGAGGA CCGGATCTGC
ACCACCATCC TCGAGATGCT CAATGTCGAA GGTATCGTTC TGGAACCTGC AGGCGCGCTC
GCCGTCGAGG CGCTGGGCGA CCTGCGCACA TGGATTAAGG GTAAGACCGT GGTTTGTCTG
ACTTCCGGCG GGAACTTTGA TTTCGAGCGA CTGCCAGAGG TCAAGGAACG GGCGCAGCGC
TATTCCGGGG TGAAGAAATA CTTCCTGCTG CGCCTGCCGC AACGTCCCGG CGCGCTCAAG
GAATTCCTGA ACATTCTTGG GCCGGATGAT GACATCGCAC GTTTTGAATA CATGAAGAAG
TCTGCGCGCA ACTTCGGCTC GGTCCTGATC GGGATCGAGA CCAAGCGCCC AGAGAACTTC
GCGCCGCTGT TTGCGCAACT GGATGCGGCG GGTTTCACCT ACACCGACAT CACAAATGAC
GAGACACTGG CGCAGTTCGT GATCTGA
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| Protein sequence | MTNFRTQAKA AEAAMRDVFP PTPLQRNELL SQRFGAEIYL KREDLSPVRS YKIRGALNAM
RKQTSKDLFV CASAGNHAQG MAYMCRQMDK RGVIFMPVTT PQQKIQKTRM FGGDNVEVHL
IGDYFDDTLS AAQAWCAEKG GYFLSPFDDA DVIEGQASIA VEIEAQLGKA PDHIVLPVGG
GGMSSGVVRY FGEDVHALLV EPEGGACLKA ALEAGHPTPL NRVDTFVDGA AVGKIGERPF
DILRSVPLPD VLTVSEDRIC TTILEMLNVE GIVLEPAGAL AVEALGDLRT WIKGKTVVCL
TSGGNFDFER LPEVKERAQR YSGVKKYFLL RLPQRPGALK EFLNILGPDD DIARFEYMKK
SARNFGSVLI GIETKRPENF APLFAQLDAA GFTYTDITND ETLAQFVI
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