| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2858 |
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| Symbol | |
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| ID | 4076392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3027669 |
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| End bp | 3028400 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008187 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_614852 |
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| Protein GI | 99082698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.629828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.501512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAA TCGTACTCGA TACGGAAACC ACAGGCTTTG ACCCGTTTTC TGGCGACCGA
ATTGTCGAAA TCGGGGCTGT GGAGCTCCTG AATCATATGC CAACCGGTGA GACATTCCAC
GTCTACATCA ACCCGCAGCG ATCGATGCCG CACGAGGCCT TTGGCGTGCA TGGTATTGGT
CCCGATCTGT TGGAACCACC GCAACCGCCT GCCCCCGGTC AGGTGATCCT GAAGGACAAG
CCACTCTTTG CCGAGGTAGG CCAGGCGTTC CTGGACTTTG TGCGTGATTC AAAGATGGTC
ATTCACAATG CCAGCTTTGA TATGAAGTTC CTGAACGCGG AGCTTGGGTG GATGAACCTG
CCGCAGCTTC CGATGGATCA GGCTATTGAT ACTCTGGCCA TGGCGCGCAA GCGATTTCCC
GGATCTCCGG CAACGCTGGA TGCGCTATGC CGACGCTTTG GGATCGACAA TTCCAACCGG
ACGCTGCATG GCGCGCTCTT GGACTCCGAG ATCCTCGCAG ATGTGTACCT CGAGCTGATC
GGAGGCCGGC AGCCGGATTT TGGGCTTTCA GCACAATCAA GCGGTGGACA AAACGCAGTT
GATACCAATT GGCGCCCCGC GCCGCGTGAG ACGCCCCTGC CCTCTCGGCT GACGGCCGAG
GAAAAAGCGG CCCACGACGA GTTTGTGGGC AAACTTGGCG AGGATGCTTT GTGGGCTGTT
ACCTCGGAAT GA
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| Protein sequence | MREIVLDTET TGFDPFSGDR IVEIGAVELL NHMPTGETFH VYINPQRSMP HEAFGVHGIG
PDLLEPPQPP APGQVILKDK PLFAEVGQAF LDFVRDSKMV IHNASFDMKF LNAELGWMNL
PQLPMDQAID TLAMARKRFP GSPATLDALC RRFGIDNSNR TLHGALLDSE ILADVYLELI
GGRQPDFGLS AQSSGGQNAV DTNWRPAPRE TPLPSRLTAE EKAAHDEFVG KLGEDALWAV
TSE
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