Gene TM1040_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2804 
Symbol 
ID4076572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2965650 
End bp2966165 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content56% 
IMG OID638008129 
Productmethionine sulfoxide reductase A 
Protein accessionYP_614798 
Protein GI99082644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.961947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.595065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA CTGAACGCGC CGTTCTGGCA GGCGGCTGCT TCTGGGGCAT GCAGGAGCTA 
ATCCGTCATC GCAAGGGCGT CCTCAGCACC CGCGTCGGCT ATACCGGTGG TGATGTGCCC
AATGCGACGT ACAAGAACCA CGGCACCCAC GCAGAAGGCA TCGAGATCAC CTTTGATCCC
GAACAGACCT CCTATCGCGA GATGTTGGAG TTCTTTTTTC AGATCCATGA CCCAACAACG
GTCAATCGTC AGGGTAACGA TATCGGTATG AGCTATCGCT CTGCGATCTA CTACGTCGAT
GCGCGTCAAA AACAAATTGC CGAGGACACG ATTGCAGATG TCGAAGCTTC CGGAATTTGG
CCCGGCAAGG TCGTGACCGA AGTGGAACCC GTTGGGGATT TCTGGGAGGC AGAGGCAGAG
CATCAAGACT ACCTGCAGCG CCTGCCCAAT GGCTATACCT GCCATTTTCC CCGTCCCGAC
TGGGTCCTGC CCAAACGGGA TCAAGCTGCA GAATAA
 
Protein sequence
MTTTERAVLA GGCFWGMQEL IRHRKGVLST RVGYTGGDVP NATYKNHGTH AEGIEITFDP 
EQTSYREMLE FFFQIHDPTT VNRQGNDIGM SYRSAIYYVD ARQKQIAEDT IADVEASGIW
PGKVVTEVEP VGDFWEAEAE HQDYLQRLPN GYTCHFPRPD WVLPKRDQAA E