Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2802 |
Symbol | |
ID | 4076570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2964165 |
End bp | 2965082 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008127 |
Product | hypothetical protein |
Protein accession | YP_614796 |
Protein GI | 99082642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.930073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGC GCGCGATTTT GATGGGGTTG GCCTTCGCCC TGATGTGGTC CTCTGCCTTT ACCTCGGCGC GGATCATCGT TGCGGATGCG TCTCCGCTCT TTTCTCTGGC GATGCGGTTC TTGCTCTCTG GTCTCATAGG CGTGGCGATC GCACGCGCCA TGGGGCAGAC GTGGCGCCTG ACGCCCGCAC AGTGGAAGGC GACGATCCTT TTTGGGATCT GCCAGAATGC GCTCTACCTC GGCCTGAACT TCGTGGCGAT GCAATGGGTC GAAGCCTCTA TGGCAGCCAT TATCGCCTCC ACAATGCCGC TCCTGGTCGC CTTGGCATCC CTGGTGCTGT TTCGCGAGCC GATCCGGCCT CTCGGCATGC TGGGTTTGGT CGCGGGCGTT GCTGGTGTTG CCTTGATCAT GGGCACCCGG ATCAGCGCCG GTGTCGACCT CCTTGGCATT GCGCTCTGCG GTCTTGGAGT GCTGGCGCTT ACCACGGCGA CGCTAGCCTT GCGCGGGGCG ACCTCGGGTG GGAACTTCAT GATGGTGGTT GGTCTGCAGA TGCTTGTGGG CTCCGCTGCG CTCTTTCCCG CAGCCTTTGC GTTTGAGACC ATTCGTGTTG ACCCAAGCTG GCCTCTGGCG ATCGCTTTTG TCTATACCAC TTTCGTCCCC GGTTTGGCCG CGACTTTGAT CTGGGTGATG CTCTTGAACC GGATCGGGGC TGTGCGCGCT GCGACTTTCC ACTTCCTGAA CCCGGTCTTC GGGGTCGCTG TTGCAAGCTC ACTCCTTGGC GAGAGGCTCG GGCTCCTCGA TATGGCTGGG GTCGCGGTTG TAACCTTCGG AATTCTGGCG GTGCAACTAG CGCGGCAACC CGCTACCGCA GCCCCAGCGC GCACGTCTAC AGCCGAGCCG CAGATGGGTC AGCGTTGA
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Protein sequence | MDLRAILMGL AFALMWSSAF TSARIIVADA SPLFSLAMRF LLSGLIGVAI ARAMGQTWRL TPAQWKATIL FGICQNALYL GLNFVAMQWV EASMAAIIAS TMPLLVALAS LVLFREPIRP LGMLGLVAGV AGVALIMGTR ISAGVDLLGI ALCGLGVLAL TTATLALRGA TSGGNFMMVV GLQMLVGSAA LFPAAFAFET IRVDPSWPLA IAFVYTTFVP GLAATLIWVM LLNRIGAVRA ATFHFLNPVF GVAVASSLLG ERLGLLDMAG VAVVTFGILA VQLARQPATA APARTSTAEP QMGQR
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