| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2797 |
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| Symbol | |
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| ID | 4076565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2958859 |
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| End bp | 2959806 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008122 |
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| Product | transcriptional regulator |
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| Protein accession | YP_614791 |
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| Protein GI | 99082637 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.558867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAT GGACAAATGA TCTTGCCACA GCGAGCCAGG TGGACATTCT CCTCTTTGAT
GACTTTTCCG GTCATTGCCT CGCAAATACC GTGGAGCCGA TGCGTGCCGC CAATACGCTA
GCAGGGCGCG AACTCTACCG GTGGCGATTT CTATCACTGA ACAGCAGCCG TGTCGTTTCA
TCCTCCGGCA TGGAGGTGAC GGCCCATGCG CAACTGGCAG ACTGCCGCGG GGACATGCTG
GCCGTGATGC CAAGCTACAA CTTTCTGCGC CATGATACGC CAGAAACCCG GCGCGCCCTC
CGTGCTGCGG CCATGCGCTA TCGCGAGTTG GCGGGGCTGG ATACCGGTCC CTGGCTTCTG
GCCGCAGCGG GCTTGCTGGA TGGGCGACGG GCAACCATTC ATTGGGACGA GTTGGAGCGG
TTGGCGGAGG CCTACCCCGA CATTGACGTC CAGCGCAGCC GCTACGTGCT TGATGGGAAT
AGGATCACCT GTACCGGCGC GCTCGCGGCG TTTGATCTGA TGCTGGAGCG GATCGGCATC
GCTCATGGTC AAGCGCTGCG GCTGGAGGTT GCGGCCCTGT TTATGTCCAC CGAAGGCAGC
GGCCCCACAC CGGAATCGAT GCTGGCACGC ACAAAGGTCG TGGCCCGTGC CGTCGGGGTG
ATGCAAGCGC ATGTCGAGGA GCCGCTCTCG ATCCCGGAGA TCGCTCGGCA AATCGGCCGT
TCGCGCAAGG ATCTTGAGGC ACGCATGAAA TCCGATCTGG GCGCCACTCC TGCAAAAGTC
TATCGACGGC TGCGCCTCAT TCAGGCTCGA AAGCTCATAT TAGAGACTGA TATTGGCATC
TCAGAGGTTG CGACCCGCAC CGGATATGAA AATCCGAGCG CGCTGACACG GGCTTTTCGA
GTTGAATTCG GAACAACACC CCGCGCCCTG CGCGCCCCGA CCTCGTGA
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| Protein sequence | MQKWTNDLAT ASQVDILLFD DFSGHCLANT VEPMRAANTL AGRELYRWRF LSLNSSRVVS
SSGMEVTAHA QLADCRGDML AVMPSYNFLR HDTPETRRAL RAAAMRYREL AGLDTGPWLL
AAAGLLDGRR ATIHWDELER LAEAYPDIDV QRSRYVLDGN RITCTGALAA FDLMLERIGI
AHGQALRLEV AALFMSTEGS GPTPESMLAR TKVVARAVGV MQAHVEEPLS IPEIARQIGR
SRKDLEARMK SDLGATPAKV YRRLRLIQAR KLILETDIGI SEVATRTGYE NPSALTRAFR
VEFGTTPRAL RAPTS
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