| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2775 |
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| Symbol | |
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| ID | 4076543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2933253 |
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| End bp | 2934611 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008100 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_614769 |
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| Protein GI | 99082615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.373811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.869545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA TAAAACGCAA AGTTCTGGTG ATCGGCGCTG GCCCCGGCGG CTATGTCTGC
GCCATTCGCG CTGGGCAGCT CGGGCTCGAT ACGGTCATCG TCGATGAGGC CCGCCCCGGT
GGCACCTGTC TCAATATCGG CTGTATTCCG TCCAAGGCGA TGATCCATGC CGCCGACGAG
TTCTACAAAA TGACCCATGC AGGCGCAGGC CCGCTTGGGA TTTCGGCCGC AGGCCCGACT
ATTGATCTTG AGCAAACCGT TGCGTGGAAA GATGGCATTG TAGAGCGCTT GACTGGCGGG
GTAGGCGGGC TCTTGCGTAA AGCAGGCGTC AAGATGATCT CAGGCCGCGC CCGCTTTGTG
GATGGCAAGA CTGTTACCGT TGCAGGCGAC GAGGGCGAGA TACAGATCCG TGCCGACTAC
ATCGTGATCG CAACCGGGTC GGCCCCGGTG GAACTGCCCT TCCTGCCATT TGGGGGGGCG
GTGATGTCTT CGACCGAAGC GCTCTCCCTG ACCGAAGTGC CCGAGAGCCT AGCCGTGGTC
GGCGGCGGCT ATATCGGCCT CGAACTTGGC ACCGTGTTTG CAAAACTTGG GTCCAAGGTC
ACCGTGGTTG AGGCCGAGGA CCGTATACTG CCGCTATATG ACAAGGCGCT GACACGTCCT
GTTCACAAAC GCCTTGAGGA GCTCGGCGTG ACGGTCATGA CGGGCACCAA AGCGCAGTCA
CATGAGGGCG GCGCGCTGCA AACTGATGCT GGTGAAATCG CTGCAGAGCG TGTGCTTGTG
ACGGTCGGGC GCAGGCCGCG CACTCAGGGC ATTGGTATTG ATGAGTTGTC TCTGACGATG
AACGGGCCTT TCATCCGCAT CGACAAGGTC TGCCAGACCT CGATGCGGGG GATCTATGCA
ATCGGGGACG TGACCGGAGA GCCCATGCTT GCCCATCGTG CGATGGCGCA GGGGGAGATG
GTGGCGGAAT ATCTGGCCGG GCAAGCGGTA GAGTGGGACA AGCGCGCGAT CCCTGCCGTG
TGTTTTACCG ATCCGGAGAT TGTCACCTGT GGCGTGCTCC CCGGCGAGGT CGAGGGCACC
AAATCGGCCG AGTTTCCGTT TGTGGCCAAT GGTCGTGCGA TGACAACCGA ACGCGATGAG
GGTTTCATTC GGGTGGTCTG GCGCGAAGCG GACAATGCGG TTCTGGGGCT GCAGGGTGTC
GGCGTGGGCA TATCCGAGCT CTCTTCGGCG TTTTCGCTCG CCATCGAGAT GGGCGCCTGC
CTTGAGGATA TCGCCGCCAC CATCCATGCG CATCCAACAC AGTCCGAGGG TTTGCAAGAG
GCCTGTCTGA AGGCGCTTGG TCACGCGTTG CACATCTGA
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| Protein sequence | MTDIKRKVLV IGAGPGGYVC AIRAGQLGLD TVIVDEARPG GTCLNIGCIP SKAMIHAADE
FYKMTHAGAG PLGISAAGPT IDLEQTVAWK DGIVERLTGG VGGLLRKAGV KMISGRARFV
DGKTVTVAGD EGEIQIRADY IVIATGSAPV ELPFLPFGGA VMSSTEALSL TEVPESLAVV
GGGYIGLELG TVFAKLGSKV TVVEAEDRIL PLYDKALTRP VHKRLEELGV TVMTGTKAQS
HEGGALQTDA GEIAAERVLV TVGRRPRTQG IGIDELSLTM NGPFIRIDKV CQTSMRGIYA
IGDVTGEPML AHRAMAQGEM VAEYLAGQAV EWDKRAIPAV CFTDPEIVTC GVLPGEVEGT
KSAEFPFVAN GRAMTTERDE GFIRVVWREA DNAVLGLQGV GVGISELSSA FSLAIEMGAC
LEDIAATIHA HPTQSEGLQE ACLKALGHAL HI
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