Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2768 |
Symbol | |
ID | 4077640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2916264 |
End bp | 2917172 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008093 |
Product | hypothetical protein |
Protein accession | YP_614762 |
Protein GI | 99082608 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGC CCCTCGCCTC TCCCGACAGG ACGGCGCGCG GCCCCGCAGG CCAGATCCGC AGCCGCGCCG AAGAGGCCGC CAGTGTCCTG CCGCCGCTGT TGGTGCAGGC CCAACAACTC GCCGGGGCGG TCTTGCTCGG CGAACACGGC CGCAGGCGCT CTGGGGTGGG CGATGATTTC TGGCAATATC GCCCCGTGCA GCAAGGCGAT AGCCGTCGCA TGATCGACCA TCGCCGCTCC GCGCGTGGCG ATCAGCAATT TGTCCGCGAG CGGGAATGGC AGATTGCCCA GACTGTCCAT CTCTGGGTGG ACCAGGGACA GTCCATGCGC TTTGCCTCAG ATGGAAAACT GCCCCAAAAG ATCGACCGCG CGCGCCTGCT GGCCCTAGCG TCTGCAGTGC TGATGGTGCG CGGTGGCGAA CGTGTCGGGC TCACAGGTGG GCTGTTGCCG CCACGGCGCG GAAACATGCA AATCCTGCGA TTGGCCGAGC ATTTTACCAC TCAGGACGAC GCCACATATG CGCCACCCGA ACATCGGGCC CTCATTCCGC ATGCGCGGGC CTTGTTCATC TCTGACTTCC TCGGACCCTT TGAGGAGCTC GAGATCGCGC TGAGCAAAGC CGCAGATCGC GGCCTTCGAG GGGTGCTGTT GCAGGTGCTT GATCCAAGCG AAGAGCTGTT TCCCTTTGCA GGGCGCACCC GGTTCGAGGG ACCGCACAAA GCGCATGTTC ACGAAACACT CAAAGCATCT GCCCTGCGGG ACCGGTATCT TGAGCGTCTC GCGCAACGGC GCGATGCACT CGAAACACTC TGCCGCGCGG CAGGCTGGAC GCTTGGGCTG CATCACACCG GCGACAGCGC CCAATCGGGG CTGCTGTGGC TCTATCACGC ATTGGAGCGG CGGCAATGA
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Protein sequence | MSLPLASPDR TARGPAGQIR SRAEEAASVL PPLLVQAQQL AGAVLLGEHG RRRSGVGDDF WQYRPVQQGD SRRMIDHRRS ARGDQQFVRE REWQIAQTVH LWVDQGQSMR FASDGKLPQK IDRARLLALA SAVLMVRGGE RVGLTGGLLP PRRGNMQILR LAEHFTTQDD ATYAPPEHRA LIPHARALFI SDFLGPFEEL EIALSKAADR GLRGVLLQVL DPSEELFPFA GRTRFEGPHK AHVHETLKAS ALRDRYLERL AQRRDALETL CRAAGWTLGL HHTGDSAQSG LLWLYHALER RQ
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