Gene TM1040_2768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2768 
Symbol 
ID4077640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2916264 
End bp2917172 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID638008093 
Producthypothetical protein 
Protein accessionYP_614762 
Protein GI99082608 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC CCCTCGCCTC TCCCGACAGG ACGGCGCGCG GCCCCGCAGG CCAGATCCGC 
AGCCGCGCCG AAGAGGCCGC CAGTGTCCTG CCGCCGCTGT TGGTGCAGGC CCAACAACTC
GCCGGGGCGG TCTTGCTCGG CGAACACGGC CGCAGGCGCT CTGGGGTGGG CGATGATTTC
TGGCAATATC GCCCCGTGCA GCAAGGCGAT AGCCGTCGCA TGATCGACCA TCGCCGCTCC
GCGCGTGGCG ATCAGCAATT TGTCCGCGAG CGGGAATGGC AGATTGCCCA GACTGTCCAT
CTCTGGGTGG ACCAGGGACA GTCCATGCGC TTTGCCTCAG ATGGAAAACT GCCCCAAAAG
ATCGACCGCG CGCGCCTGCT GGCCCTAGCG TCTGCAGTGC TGATGGTGCG CGGTGGCGAA
CGTGTCGGGC TCACAGGTGG GCTGTTGCCG CCACGGCGCG GAAACATGCA AATCCTGCGA
TTGGCCGAGC ATTTTACCAC TCAGGACGAC GCCACATATG CGCCACCCGA ACATCGGGCC
CTCATTCCGC ATGCGCGGGC CTTGTTCATC TCTGACTTCC TCGGACCCTT TGAGGAGCTC
GAGATCGCGC TGAGCAAAGC CGCAGATCGC GGCCTTCGAG GGGTGCTGTT GCAGGTGCTT
GATCCAAGCG AAGAGCTGTT TCCCTTTGCA GGGCGCACCC GGTTCGAGGG ACCGCACAAA
GCGCATGTTC ACGAAACACT CAAAGCATCT GCCCTGCGGG ACCGGTATCT TGAGCGTCTC
GCGCAACGGC GCGATGCACT CGAAACACTC TGCCGCGCGG CAGGCTGGAC GCTTGGGCTG
CATCACACCG GCGACAGCGC CCAATCGGGG CTGCTGTGGC TCTATCACGC ATTGGAGCGG
CGGCAATGA
 
Protein sequence
MSLPLASPDR TARGPAGQIR SRAEEAASVL PPLLVQAQQL AGAVLLGEHG RRRSGVGDDF 
WQYRPVQQGD SRRMIDHRRS ARGDQQFVRE REWQIAQTVH LWVDQGQSMR FASDGKLPQK
IDRARLLALA SAVLMVRGGE RVGLTGGLLP PRRGNMQILR LAEHFTTQDD ATYAPPEHRA
LIPHARALFI SDFLGPFEEL EIALSKAADR GLRGVLLQVL DPSEELFPFA GRTRFEGPHK
AHVHETLKAS ALRDRYLERL AQRRDALETL CRAAGWTLGL HHTGDSAQSG LLWLYHALER
RQ