| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2747 |
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| Symbol | |
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| ID | 4077619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2895144 |
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| End bp | 2896046 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008072 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_614741 |
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| Protein GI | 99082587 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0592883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTG AGAACAGTCC CACGCAGGGA GCAGTCGATC TGATCTCCAA CCTGCGGGAG
TTGAACGGCA GTTTTGCCGC GCGCGAGCAA AAGGTCGCGG ACTTCGTTTC GGCGCACCTT
GAAGAGATCT CCAACATGAC GATTGCCGAG CTGGCGGGCG CAGTGGGGGT CAGCACGCCG
ACGGTTGTGC GTTTCTGTCG GAGCATGGGC TGTGATGGCT TTCGCGAGTT CAAGCTGCGG
CTGGCGCAGA ATCTCGCCGT GAGCCTGCAA TACCTCGCGC CCAGTCAGCG CGAGGTTCCC
GAAGGTGGTG CAGGCGCTGT CGATCAGGTG CTCGGCGCGC TCTATGCAAC CGTCAATGTG
ATGCGTCAGC AGCTGGTGCC AGAACGGCTG GATGCGGCGG CGGCGGCCCT GGCCGCGGCG
GGGCAGATTG TTGTGGCCGG GGTTGGCGGG GGCTCGACCA TGGTTGCACA GGAGGCGGCC
AACCGTATGT TCCGGCTTGG TATTCCAGCC GTTTCGATCT CTGACAGCTA TTTGCTGCAA
ATGCGCGCCG CAACCCTGGT CAAGGGGGAC GTCCTGCTGC TGGTCTCTGC TAGTGGCGCG
GCGGATGAGA TCGTCAGCGC TGCAGCGATT GCCGGCGGCT ATGGTGCGAC CGTAGTGGCG
ATCGCCCGAC CAGGCAGCCG ATTGGCGCAA GAAGCGACAG TCGCGATCGA AGCCGATCTG
CCCGAAGATC CCGACATTCT GAAGCCCACC GCGTCGCGCT ATGCGCATCT GGTGATCGTC
GACGCGCTTG CGATGTCCGT GGCGCAGGCG CGGACAGCGG CCACGACAGA GAACCTGCGC
CGCATCCGGG CCTCGCTCAC CGCTTATCAC GGTCGCACTG GACCTCAGCC GCTCGGGGAT
TGA
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| Protein sequence | MAPENSPTQG AVDLISNLRE LNGSFAAREQ KVADFVSAHL EEISNMTIAE LAGAVGVSTP
TVVRFCRSMG CDGFREFKLR LAQNLAVSLQ YLAPSQREVP EGGAGAVDQV LGALYATVNV
MRQQLVPERL DAAAAALAAA GQIVVAGVGG GSTMVAQEAA NRMFRLGIPA VSISDSYLLQ
MRAATLVKGD VLLLVSASGA ADEIVSAAAI AGGYGATVVA IARPGSRLAQ EATVAIEADL
PEDPDILKPT ASRYAHLVIV DALAMSVAQA RTAATTENLR RIRASLTAYH GRTGPQPLGD
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