| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2746 |
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| Symbol | |
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| ID | 4077618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2891848 |
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| End bp | 2895138 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008071 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_614740 |
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| Protein GI | 99082586 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.455726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCTAC AGGGAATTCG CGCTCGCCTT TTGTTCACCT TCCTCCTCGC GTCCGTTTTG
CCGCTGACGC TGGGCGGGAT GGTGTTTTAT CGGCTGGTCA ATCAGACCAT CGCCACCGAG
ACCTTTCAGA AGGTAGCCTT TGTGCGCGAT GCCAAGGCCA GCGAGATCAT GCAGTATATG
ACCTACGCGC GCAGGCAGGC GGAAAACCTC GCCCAATCGG CCAATGTGCG CTACTCGGTC
GGAGAGTTTT ACGGCTTCAG CCATGCGCTT CGGCAGATGC AGGGCACGCC CGAGGAAGCC
GGTGCCAAGC TGCGCAATAT CTTTGATATT GATGGCCCTG CAGCGCCGCC TTCGGGGATT
GGCAGCGAAG ACCGGCTGCT GCGCGAAGCT TTGGAGTATT CCAACACTCA CCGCCGGTTT
CATGCGGGAT TCCTCGACTT TCTGAATGAG GCCGAGTTCG ACAATCTCTA TCTCGCCGAT
CGCCACGGGC AGGTGGTCTA CTCGGTTCAC AAGGATCGCT ACCTCGGGCG CGTGCTGCAG
CCGCAGACGC CGGGACTGGG ACAGGCCTAT ACACGCGCGG TAAACCAGCC TGGGTTTGAT
CCGGTGTTTC AGGATTATGC GCGGGACGCG GTGACCGGTC AGCTTGTGGC TTACCTCGCG
GTGCCCGTGC GGCTCCATGG TAGTAATAAG GGCGCGATGA TCCTACGGAT GCCTCCGAAC
AGCCTGCACC GTCTGATGAT CGAAAGCGAA ACCGCCCTCA CCGTGCTGTC GTCGCAGGGC
ACTATCATCG CCACCAGTGC GCCACCTCCA GACAATGCCA CCGAAAGCCT TCCTGAAGCG
ATGCGTGCTA GCGAGGGTGT CGCACTGCTT GAGGCTGGCC TCTCCGGTGA TCCGTCGCTT
TCGGCCTGGC GTGTGTTGGA GCCCCCCTTC CCTGCATGGA CCGTCGTCGC CGAGGCGGAT
CGGGATGCGG CATTCGCCAA CAGCAGCCAG CTGCGAAACG CATTGTTCCT GATCGGCGCG
GTTGCCGTCA CGGGGCTTGG GCTTTTGTCA TTTGTCTTTG CGAATGCGCT CACCCGCCCG
GTTCGGCGTC TCTCGGAGGC GGCCAGCGCG GTTGCCACCG GCAGTCTGAA TGAGGCCCTG
CCAGAATACG AGCGCCCAGT CGAATACGCG CGCCTTTCAC GCGCAGTGAA CCAGATGCGG
CGCGCTCTGC GTGACCAACT GGATATGATC CGGGACAAGA ACGCGGAGCT GCAGGAAAAC
CTGCGCCAGA TAGGTGAAAA GAACGCCAAA CTCGAGGAGG CGGACCGGAT GAAGGATCGC
TTCCTCGCCA ATACCTCGCA CGAGTTGCGC ACGCCGCTAA ACGGCATCAT CGGCATCCTC
GAGACGCTCG AAGGCGGGGC CATGGGCGAT ATGCTGCCCG CGCAAGCCAG CCAGTTACGC
CTGATCACCT TCAGCGCGCG CCGCCTGTCG CGGCTTGTGG ACGATCTTCT GGACATCTAC
CGCATCCGCG AGGGTCGGAT GCGGCTTGAT CTGCAACCGG TGGATGCCTC GCACGCGTTG
CGCAATGTGC TGCAACTCCT GCAACCGACC TTTCAGGTGG ATCCCGCCAA ATTCCACGTC
GATCTCCCCG GGGACTTGCC TGCCCTAACC GCGGACCCGG TGCGCTTTGA ACAGATCCTG
TTCAACCTGC TGTCAAATGC GGTGAAATAC GGTGGTGGCA GCGAAGTCTA CATCACCGCC
GAAGAGCGCC CATCTGGTCA TGTGGCGCTG GCGATCCGCG ATCACGGTCC CGGCATTGCC
GCCGACAGCA TGGAACGCAT CTTTCACCCG TTGGAACAGC TGATGCCGGA TGGATCCGGG
CAGGCCACAG GCACCGGACT GGGCCTGACG ATCGCGCGCC ACCTGGCCGA TCTGATGGCG
GGTAGCATCG AGGTCTCGAG CACCCCCGGC GAAGGATCGG AATTCCGGGT GGTGCTGCCG
CTGTCTGACC TGCCCGCCGT GGCACCGCTT GAGGAGTGGC TGCCAAACCC GCCCGCCCCG
GTGCCGATGA TGCACACCAA ACCGGGCGAA CCCAGCCCGA TTGCGCCGGA TGGTTCGCCC
CTGATCCTTG CCGTGGATGA CGAGCCGATC AATTTGCAGG TCCTGCAGAA TGTCCTTCTA
CCGCAGGGAT ACCGCATCAC CACCGCCCGC AACGGCTCCG AAGCGCTGCG CAGCGTGGCA
CAGGAGCGGC CAGACCTTAT TGTGCTCGAT GTCATGATGG CGGGATTGAG CGGCCTCGAC
GTCGCCCGCG ATTTGCGCCG TCGTCATGGG CTGCATGAGT TACCGATCAT CTTGCTGACC
GCACGCGGCC GCACCAGCGA TATGCTGGCG GGGTTTGAGG CGGGGGCAAA CGACTATGTG
GTGAAGCCCT TTGTCAAAGA CGAACTACTG AGCCGTATCC GCACCCTTCT CGAAGCCAGC
CGGGCGCGCA GCCGCGCCGA AGAGAACCGA GAACTGAAAG AAGAGATCGA GCGCCGGATC
CAGATCGAGG ACGCCCTGCG TCTGTCGCAA CGGCGGATGA CGCAGCTGCT CGATGTTTTG
GAGGATGGGC TGATCTGCAT CAACGCCCGC GGGGTCGTCA CCTATGTCAA CGAAGCCGCT
CAACAGGTGC TGAAGCAGCG TGTGACTGTG AATCGTAGCC GGCTCAGCGA TGTCCTGCCT
CAGGACGTGC TGGCGCCGCT CGAACAAACG GAGGTCGAGG ACGAGCCGAT CCATATGGAG
ATCACCCTGC GCGGCACCTC CCATCAGGTC AGCCTCTTTG CCATGCTGCC CGAAGCGGGT
GGCGGGCGGG CGGTGCTCTT TACGCAGGCG CAGTCCTCGC GGGATCAGTT CGTCCACTCC
CTGCGCGATG TGGTCGACAC GTCGCTGCCC TCGCTGATCC CCGGCGACGT AACCGAAGAC
GCCAGCACCA CCCCAGGCGA CACCTATCGC GACACCATCG TCACGCTGAT GTCGGACTCG
CTGGACATCT GGAGTGCGGC CACGGGAAAG GGCAAGATTG ACTTTGCCGA GACCAGCGGC
ATCTGGCGGG TGAATCTCGA CAAGACATCT TTGCAGACGC GCACACTCGA CAAATATCTG
CTGATCGAAA CCCTGCCCGA CAATCCGCGC TGGCGAGATG TTCTAAAAAC CGTGAGCTTT
GTGCTCTCTC TCAAGGAACG CGAGACCGCA GACCCGGCGC TCGCGCAGCG GTTCGAGGCA
CTGGAAACCC AGCTTGAAGC ATTTCGTACT CTGATCGCCC AACGCGGGTG A
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| Protein sequence | MPLQGIRARL LFTFLLASVL PLTLGGMVFY RLVNQTIATE TFQKVAFVRD AKASEIMQYM
TYARRQAENL AQSANVRYSV GEFYGFSHAL RQMQGTPEEA GAKLRNIFDI DGPAAPPSGI
GSEDRLLREA LEYSNTHRRF HAGFLDFLNE AEFDNLYLAD RHGQVVYSVH KDRYLGRVLQ
PQTPGLGQAY TRAVNQPGFD PVFQDYARDA VTGQLVAYLA VPVRLHGSNK GAMILRMPPN
SLHRLMIESE TALTVLSSQG TIIATSAPPP DNATESLPEA MRASEGVALL EAGLSGDPSL
SAWRVLEPPF PAWTVVAEAD RDAAFANSSQ LRNALFLIGA VAVTGLGLLS FVFANALTRP
VRRLSEAASA VATGSLNEAL PEYERPVEYA RLSRAVNQMR RALRDQLDMI RDKNAELQEN
LRQIGEKNAK LEEADRMKDR FLANTSHELR TPLNGIIGIL ETLEGGAMGD MLPAQASQLR
LITFSARRLS RLVDDLLDIY RIREGRMRLD LQPVDASHAL RNVLQLLQPT FQVDPAKFHV
DLPGDLPALT ADPVRFEQIL FNLLSNAVKY GGGSEVYITA EERPSGHVAL AIRDHGPGIA
ADSMERIFHP LEQLMPDGSG QATGTGLGLT IARHLADLMA GSIEVSSTPG EGSEFRVVLP
LSDLPAVAPL EEWLPNPPAP VPMMHTKPGE PSPIAPDGSP LILAVDDEPI NLQVLQNVLL
PQGYRITTAR NGSEALRSVA QERPDLIVLD VMMAGLSGLD VARDLRRRHG LHELPIILLT
ARGRTSDMLA GFEAGANDYV VKPFVKDELL SRIRTLLEAS RARSRAEENR ELKEEIERRI
QIEDALRLSQ RRMTQLLDVL EDGLICINAR GVVTYVNEAA QQVLKQRVTV NRSRLSDVLP
QDVLAPLEQT EVEDEPIHME ITLRGTSHQV SLFAMLPEAG GGRAVLFTQA QSSRDQFVHS
LRDVVDTSLP SLIPGDVTED ASTTPGDTYR DTIVTLMSDS LDIWSAATGK GKIDFAETSG
IWRVNLDKTS LQTRTLDKYL LIETLPDNPR WRDVLKTVSF VLSLKERETA DPALAQRFEA
LETQLEAFRT LIAQRG
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