| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2745 |
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| Symbol | |
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| ID | 4077617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2889841 |
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| End bp | 2891496 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008070 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_614739 |
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| Protein GI | 99082585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CTGCTACCGC CGGGCTCTTG GCCTCGGTTG CGCTCTGGAC CACTGCCGCA
CAGGCAGAGG AAACCGTGCT GAGCGCGTTG CCGGAACAGG TCACCGCTTG GGTGGAGAAC
TTCAACCCGT TCAACCAGAC CACCGCGGCG CCGTCCGTCA TGCATTTCAT GTACGAGCCG
CTGATCATTT TCAACGCGCT CGACGGCGGC AAGCCGATCT ACCGTCTGGC GACCGCATTT
GAGTATTCCG ATGATCTGAG TTCCATCACC GTGACCCTGC GCGATGGCGT TCAGTGGTCC
GATGGCGAAG CATTCACCGC CGATGATGTG GTCAAATCCT TTGATCTGGC GCTGAGCGAT
CCGGCCCTCG ACAGCGTCGG CATGGCGCAG ATGCTCTCTG GTGTCGAGAA ACTCGACGAG
ATGACGGTGA AGTTCAACCT CTCCACCCCT TCAAGCCAGG CCATGTACCA GATCGTGCGT
GTGCCAATCG TCCCCGAACA CGTCTGGAGC AACGTCTCCG ATCCCGTGAC CTTTACCAAC
CCTGATCCCG TGGGGTCCGG TCCGCTGACA GAGATCCGCC GTTTCACGCC GCAGGAATAC
ATCCAGTGCC GCAACAACAA TTACTGGGAC GCTGAGAGCC TCAAGGTCGA CTGCATGCGT
TTCCCGCAGA TCGCCAACAA CGATCAGGCG CTGGCAGCGG CCGCGAATGG CGAACTGGAC
TGGATGGGGT CCTTCCTGCC CGACATCGAC AACACCTTTG TCGCCAAGGA CCCCGAGCAT
CACAGCTATT GGCTGCCCGC AGGCTCTCTC GTGGCGTTCT ACATGAACTT CGAGGCCAAA
GAAGCCGGCG ACAAAGAAGC CGTGAACAAC GTCGCCTTCC GCCGCGCGGT GTCGATGGCC
TTCGACCGCG AAGCGATGGT GGAAATTGCA GGCTATGGCT ATCCGACGAT CAACCAGTAT
CCCTCTGGTC TGGGCCGCGC TTATCACGCG TGGAACAACC CCGAAGTCGA GGACAAATTT
GGCGCGTTTA CCCAATATGA CATCGAGGGC GCCAAGGCAC AGCTGGCCGA GGCCGGGTTC
AAGGACATTG ACGGTGACGG CTTTGTGGAA ACCCCAAGCG GTGAGCAGAT CGACATTGAA
GTCATCGTGC CCAACGGCTG GACCGACTGG GTCAACAGCA GCCAGATCGC GGTCGAGGGC
CTGAATGCAG CCGGGATCAA GGCCAATGTC TCAACACCTG AATCCGCGAT CTGGACCGAA
AAGCTGATCA AGGGCGACTA TGACATGGCG ATCAACTCGG TTCGTGTTGG TGCGACCCCC
TTCAACCAGT ATCTGGACTC GCTCCACGAG ATTAATCAGG CCAAGTCGCG TTTTGCCGCG
TCGCGGTACT ACAACGAAGA GCTGAGCGAC CTTCTGGATG CCTTCACCCA GACCAGCGAC
ACCGACAAGC AGATGGCGAT CATGTCCGAT GTACAAGAGA TCGTCGGTGA AGACATGCCG
CTGGCCTATG TGTTCAACAA CCCGCGCTGG TATCAGTACA ACACCAAGCG TTTCGAAGGC
TTCTTCAACG CTGACAACCC GGTGGCCAAC CCGGTGGTTC ACAAAACCAA CCCGGCCCGT
CTGATCCACC TCCTGAACCT GCGCCCGGTC GAGTAA
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| Protein sequence | MKFTATAGLL ASVALWTTAA QAEETVLSAL PEQVTAWVEN FNPFNQTTAA PSVMHFMYEP
LIIFNALDGG KPIYRLATAF EYSDDLSSIT VTLRDGVQWS DGEAFTADDV VKSFDLALSD
PALDSVGMAQ MLSGVEKLDE MTVKFNLSTP SSQAMYQIVR VPIVPEHVWS NVSDPVTFTN
PDPVGSGPLT EIRRFTPQEY IQCRNNNYWD AESLKVDCMR FPQIANNDQA LAAAANGELD
WMGSFLPDID NTFVAKDPEH HSYWLPAGSL VAFYMNFEAK EAGDKEAVNN VAFRRAVSMA
FDREAMVEIA GYGYPTINQY PSGLGRAYHA WNNPEVEDKF GAFTQYDIEG AKAQLAEAGF
KDIDGDGFVE TPSGEQIDIE VIVPNGWTDW VNSSQIAVEG LNAAGIKANV STPESAIWTE
KLIKGDYDMA INSVRVGATP FNQYLDSLHE INQAKSRFAA SRYYNEELSD LLDAFTQTSD
TDKQMAIMSD VQEIVGEDMP LAYVFNNPRW YQYNTKRFEG FFNADNPVAN PVVHKTNPAR
LIHLLNLRPV E
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