| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2737 |
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| Symbol | |
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| ID | 4077609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2881941 |
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| End bp | 2883143 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008062 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_614731 |
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| Protein GI | 99082577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.428956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA CCAAAGGCTT TGCCACCCGC GCCATCCACC ACGCCTATGA CCCGATGCAG
AACGAGGGCG CGCTGACGCC GCCGCTGCAT CTGACCTCCA CCTTCGTGTT CGAAAATGCC
GAAGCCGGCG GCGAGATGTT CGCAGGCGAG CGCGAGGGGC ATATCTACAG CCGAATCTCG
AACCCGACCT GTTCGCTTCT GGAGCAGCGT ATCGCAACGC TAGAAGGGGC CGAAGCCGGT
CTGGCGCTGG CAAGCGGCAT GGGCGCGGTG ACGGCGATTC TCTGGACGCT CCTCAGCCCC
GGTGACGAGG TGATCGTCGA CAAGACGCTC TATGGGTGCA CCTTTGCCTA TATGCGCCAT
GGGCTTGCAA AATGGGGCGT GACCATCACC CACGTCGACA TGACCGACCC CGCCGCCCTG
AGCGCCGCCG TGAGCGAGAA GACCCGCGTC GTCTATTTCG AGACGCCCGC CAACCCCAAC
ATGCGCTTGG TCGACATCAA ACGCGCCGCA GAGATTGCGC ATTCCGTCGA CGCGCGCGTT
GTGGTCGACA ACACCTATGC GACGCCCTAC CTCACGCGCC CGATCGAGCT TGGCGCGGAT
CTGGTGCTGC ATTCGGCGAC CAAATACCTT GGTGGTCACG GCGATGTGGT CGCAGGGCTT
GTGGCGGGCA GCGCCGAGCT TTTGACCGAA ATCCGCCTTG TCGGCATGAA GGACATGACC
GGTGCGGTGA TGGCGCCCTT CAATGCGATG CTGATCATGC GCGGCTTGAA AACACTGGCG
CTACGGATGG ACCGTCATTG TGCCTCGGCG CAGACCGTCG CGGAGTGGCT AGAGGCCCAG
CCCGGCGTCG CCAAGGTCTA TTTCCCCGGT CTCAAGAGCT CTGAACAGCA CGAGATCGCC
AAGGCGCAGA TGGCGCAGCC CGGCGGCATG ATTGCCTTTG AACTCGAGGG CGGCATGGAG
GCCGGGATCA GCCTGATGAA CCGCCTGCAG ATGATCCAGC GCGCGGTGTC GCTTGGCGAT
GCGGAGACGC TCATCCAGCA CCCGGCTTCG ATGACACATT CCACCTATAC CCCCGAGGAA
CGCGCGGAAC ATGGCATCAG CGATGGCTTG GTGCGCTTGT CCGTGGGGCT TGAAGAGGTT
TCGGACATTC TCGATGATCT TCAGCAAGCT CTGTCGCCTC AGATGCGTCA GGCTGCCGAG
TGA
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| Protein sequence | MSETKGFATR AIHHAYDPMQ NEGALTPPLH LTSTFVFENA EAGGEMFAGE REGHIYSRIS
NPTCSLLEQR IATLEGAEAG LALASGMGAV TAILWTLLSP GDEVIVDKTL YGCTFAYMRH
GLAKWGVTIT HVDMTDPAAL SAAVSEKTRV VYFETPANPN MRLVDIKRAA EIAHSVDARV
VVDNTYATPY LTRPIELGAD LVLHSATKYL GGHGDVVAGL VAGSAELLTE IRLVGMKDMT
GAVMAPFNAM LIMRGLKTLA LRMDRHCASA QTVAEWLEAQ PGVAKVYFPG LKSSEQHEIA
KAQMAQPGGM IAFELEGGME AGISLMNRLQ MIQRAVSLGD AETLIQHPAS MTHSTYTPEE
RAEHGISDGL VRLSVGLEEV SDILDDLQQA LSPQMRQAAE
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