Gene TM1040_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2728 
Symbol 
ID4077035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2871357 
End bp2872124 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID638008053 
Productcitrate synthase 
Protein accessionYP_614722 
Protein GI99082568 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG TGAGTGATTG GTGGCGCACG TCGATCATCG ACATGGAACC GGGCCGTATC 
GAGCTTCGGG GTCACCCAAT TCAGGATCTC ATTGGCAACG TCAGCTTTGC CGAGATGATC
TGGCTAATGG TGCGTGGGGA CCGACCCACG GCGCCGCAGT CGCGTTTGTT CGAGGCCGCC
TTGGTCTCGG CCGTGGATCA TGGCCCGCAA GCCCCCTCGA TTGCCGCGGC GCGGATGGCC
GTGACCTGCG GCTTGCCCCT GAACAATGCG ATGGCGACGG CGGTGAATAT GCTTGGCGAC
GTGCACGGCG GGGCCGGGCA GCAGGCGGTG GAGCTGTATC ACCACGTTGA CGCCCACGGC
GGGGATCTGG CAACGGCGCT TGATGATTGG CGCGCAGAGC ACGGCAAGAT CATCCCAGGC
TTTGGTCATC GGTTTCACAA ACCGACCGAC CCCCGTGCGC CGCGCCTGAT GGCGCTGGTG
TCCGAAATCG CCGAAACGGG GGCTGTCTCG GGACGGTTTC TGCGCATTGC CGAAGCCATC
GAGGCGCATA TCTCGGCAGA AAAAGGAACT GCCCTGCCAA TGAACATCGA TGGGGCAACG
GCTGTGATCT ACGCGGAGCT TGGCTTTGCC CCGCCTCTGG CGCGGGGGCT GTTTTGCCTG
TCGCGTTCGG TGGGCATTCT GTCCCACGCA TGGGAGCAGC AGCAACAGGG CGGGCGCAAC
AAGGGACCGA CCCCGCCCAA ATACAGATGG ACGTATGACC CTAACTGA
 
Protein sequence
MSDVSDWWRT SIIDMEPGRI ELRGHPIQDL IGNVSFAEMI WLMVRGDRPT APQSRLFEAA 
LVSAVDHGPQ APSIAAARMA VTCGLPLNNA MATAVNMLGD VHGGAGQQAV ELYHHVDAHG
GDLATALDDW RAEHGKIIPG FGHRFHKPTD PRAPRLMALV SEIAETGAVS GRFLRIAEAI
EAHISAEKGT ALPMNIDGAT AVIYAELGFA PPLARGLFCL SRSVGILSHA WEQQQQGGRN
KGPTPPKYRW TYDPN