Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2728 |
Symbol | |
ID | 4077035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2871357 |
End bp | 2872124 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008053 |
Product | citrate synthase |
Protein accession | YP_614722 |
Protein GI | 99082568 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATG TGAGTGATTG GTGGCGCACG TCGATCATCG ACATGGAACC GGGCCGTATC GAGCTTCGGG GTCACCCAAT TCAGGATCTC ATTGGCAACG TCAGCTTTGC CGAGATGATC TGGCTAATGG TGCGTGGGGA CCGACCCACG GCGCCGCAGT CGCGTTTGTT CGAGGCCGCC TTGGTCTCGG CCGTGGATCA TGGCCCGCAA GCCCCCTCGA TTGCCGCGGC GCGGATGGCC GTGACCTGCG GCTTGCCCCT GAACAATGCG ATGGCGACGG CGGTGAATAT GCTTGGCGAC GTGCACGGCG GGGCCGGGCA GCAGGCGGTG GAGCTGTATC ACCACGTTGA CGCCCACGGC GGGGATCTGG CAACGGCGCT TGATGATTGG CGCGCAGAGC ACGGCAAGAT CATCCCAGGC TTTGGTCATC GGTTTCACAA ACCGACCGAC CCCCGTGCGC CGCGCCTGAT GGCGCTGGTG TCCGAAATCG CCGAAACGGG GGCTGTCTCG GGACGGTTTC TGCGCATTGC CGAAGCCATC GAGGCGCATA TCTCGGCAGA AAAAGGAACT GCCCTGCCAA TGAACATCGA TGGGGCAACG GCTGTGATCT ACGCGGAGCT TGGCTTTGCC CCGCCTCTGG CGCGGGGGCT GTTTTGCCTG TCGCGTTCGG TGGGCATTCT GTCCCACGCA TGGGAGCAGC AGCAACAGGG CGGGCGCAAC AAGGGACCGA CCCCGCCCAA ATACAGATGG ACGTATGACC CTAACTGA
|
Protein sequence | MSDVSDWWRT SIIDMEPGRI ELRGHPIQDL IGNVSFAEMI WLMVRGDRPT APQSRLFEAA LVSAVDHGPQ APSIAAARMA VTCGLPLNNA MATAVNMLGD VHGGAGQQAV ELYHHVDAHG GDLATALDDW RAEHGKIIPG FGHRFHKPTD PRAPRLMALV SEIAETGAVS GRFLRIAEAI EAHISAEKGT ALPMNIDGAT AVIYAELGFA PPLARGLFCL SRSVGILSHA WEQQQQGGRN KGPTPPKYRW TYDPN
|
| |