| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2725 |
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| Symbol | |
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| ID | 4077032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2868869 |
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| End bp | 2869456 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008050 |
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| Product | exopolysaccharide synthesis, ExoD |
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| Protein accession | YP_614719 |
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| Protein GI | 99082565 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CCAGCCACCC AGTCGAAGAC GTCCTGGACC AGACCGACGC CCTCTTGCGC
GAGGGGGCGG ACGGGTTGCG GGTGTCGGAC CTCATGGATG AGTTGGGGGT CAAATCGATT
GCTGCGGTGC TCTTGGCTCC GTCGCTCGCA TTGGTCTCGC CGCTCAGTGG CATTCCGCTG
TTTTCCTCTG CGTGCGGCGT CACGATTGCG CTGATCTCGG TACAGATGCT GATGGGGCGC
AACCACCTGT GGATGCCCGA GGTGCTGTCG AAACGGTCGT TGCCAGCGGA CAAGACACAA
TATGCCATTC GCGCGCTGCG CGCATTTGCA GCATGGCTCG ATCGTCGGTT CAAACGCCGG
TTGACGTCCT TGCTGACGCC GCCGTTCTTG CGGGTGATAC AGGGCATCTG CCTGCTCTGC
GGTCTGATTA TGCCCTTTCT CGAAATCGTG CCGTTTACCT CGTCGATTTT GGGGGGCGTG
GTCGCTCTGC TGGCTTTGTC AATGTTGATC GGGGACGGGC TGATCGCGCT GGTGACGGTC
GCGGGACTGG GGCTGGCACT TGGCGGGGCC GCCCTACACC TGCTCTGA
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| Protein sequence | MTQTSHPVED VLDQTDALLR EGADGLRVSD LMDELGVKSI AAVLLAPSLA LVSPLSGIPL
FSSACGVTIA LISVQMLMGR NHLWMPEVLS KRSLPADKTQ YAIRALRAFA AWLDRRFKRR
LTSLLTPPFL RVIQGICLLC GLIMPFLEIV PFTSSILGGV VALLALSMLI GDGLIALVTV
AGLGLALGGA ALHLL
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