| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2715 |
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| Symbol | |
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| ID | 4077022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2859969 |
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| End bp | 2861120 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008040 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614709 |
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| Protein GI | 99082555 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGA CACCAACCAC CGCGTCCGAC GCCGCTTTGA CGCAGAGTTT TCATAATGCC
AGATCTCCGG CGCGCCGGGG ATTTGAGAGG AAAAAGGGGA CAAGACCCTT GAGCACAGCC
GCGCCTTCAC ACGCCGGGCT GAGAAAGACC GCCAGCGCTT TTGGCGGCTT TGTCATCGTC
ACTTTCCTGA CTTTTGTCGG ATTGATGGCG ATCACTTTCT TCATCGGCCG CGTGATCCCG
ATTGACCCGG TTCTGGCCGT GGTCGGAGAT CGCGCCACGC AAGAACAATA CGACGCCGCC
CGCATCGCCA TGGGGTTGGA TCAGCCACTG GTGGTACAGT TCATCACCTA TGTGGGCGAT
GTGTTTCAGG GCGACCTTGG CCATTCCGTT TCCACCAACC GCCCCGTCGC AGAGGATCTG
GCCCGTGTCT TCCCCGCGAC GCTCGAGATG GCGACACTTG GGATCATCAT CGGCGTCGGC
ATGGGCGTTC CGCTGGGTGT CTGGGCCGCT GCAAGGCAAG GCACATGGGT GGATCAGTTG
ATCCGCGTCT TTGCACTGCT GGGTTACTCT GTTCCTGCCT TCTGGCTTGG TCTTGTGGGG
CTGGTCGTAT TTTACGCGGG CCTTGGCTGG GTCGGCGGTC CAGGGCGTGT CGACATTTTC
TACGAGGGGC TGGTGGAACC GCGCACAGGC CTCTTGCTGG TTGATTCCCT GATCGTGGGC
GACTGGGAGG TGTTCTGGAG CGCGCTCGAC CACCTGATCC TGCCTGCCAC CATCCTTGGG
TTCTTCTCGC TGGCCTATAT CGCGCGCATG ACCCGCAGCT TCATGCTGGA TCAGCTCGGG
CAGGAATATA TCACCACCGC CCGCGTCAAA GGCGTGTCGG AATGGCGGGT GATCTGGACC
CACGGCTTTC GTCCGATCCG GGTGCCACTG ATCACGGTGA TCGGCCTCTC TTATGCCGCC
TTGCTCGAAG GCTCGGTGAT GATCGAGACG GTCTTTAGCT GGCCAGGCAT CGGCAACTAT
CTGACCGTGG CACTGCTCAA CGCCGATATG AATGCCGTCC TTGGCGCAAC CTTAGTGATC
GGGTCGGTCT TCATTCTCAT CAACAAGCTG TCGGATGTGC TCTACCGCAT TCTCGACCCG
CGCAGCCGAT AG
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| Protein sequence | MPETPTTASD AALTQSFHNA RSPARRGFER KKGTRPLSTA APSHAGLRKT ASAFGGFVIV
TFLTFVGLMA ITFFIGRVIP IDPVLAVVGD RATQEQYDAA RIAMGLDQPL VVQFITYVGD
VFQGDLGHSV STNRPVAEDL ARVFPATLEM ATLGIIIGVG MGVPLGVWAA ARQGTWVDQL
IRVFALLGYS VPAFWLGLVG LVVFYAGLGW VGGPGRVDIF YEGLVEPRTG LLLVDSLIVG
DWEVFWSALD HLILPATILG FFSLAYIARM TRSFMLDQLG QEYITTARVK GVSEWRVIWT
HGFRPIRVPL ITVIGLSYAA LLEGSVMIET VFSWPGIGNY LTVALLNADM NAVLGATLVI
GSVFILINKL SDVLYRILDP RSR
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