| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2702 |
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| Symbol | |
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| ID | 4077009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2844218 |
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| End bp | 2845183 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008027 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_614696 |
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| Protein GI | 99082542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.430916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACATTG TTCCCGAACG GGTGATTGCC GATCTTATGA CCCGCGAGGC CGCCTTTGAC
GCGGTGGAGA AGGTCTTTGC CGCCATGGCC GCCGAGGACG CCTATAACTT TCCCGTAGTG
CGCGAGGCCA TCGGCCATGA GGATGCGCTC TATGGGTTCA AGGGCGGTTT TGACCGCGCA
GGGCTGACGC TTGGCCTGAA GGCGGGCGGC TATTGGCCCC ACAACCTAGA GAAGCGCGGG
CAGATCAACC ATCAGTCCAC CGTGTTCCTC TTCGACCCGG ATACCGGCAA GGCCCACGCG
ATGGTGGGCG GCAATCTGTT GACCGCGCTG CGCACGGCGG CGGCCTCCTC GGTGTCGATC
AAGCATCTCG CCCGCGACGA TGCAAAGGTG ATCGGCATGA TCGGGGCGGG TCATCAGGCG
ACGTTTCAGC TGCGCGCCGC CCTCGAGCAG CGCAACTTCG AAAAGGTGAT CGGCTGGAAC
CTGCACCCCG AAATGCTGCC CAACATCGAA GCCGTCGCCG CAGAGGCTGG CCTGCCGTTC
GAAGCGGTCG AACTGGACGG GATGCGCGCA GCGGATGTGA TCATCTCGAT CACCTCCTCC
TTTGAGGCAA GTCTGATGGC CGATCATGTC AGCCCCGGCA CACATATCGC CTGCATGGGC
ACCGACACCA AAGGCAAACA AGAGGTCGAC CCGGCGCTTT TGGTGCGCGC TGAGGTCTTC
ACCGACGAGG TGGCGCAATC CGTCGGCATC GGAGAGGCAC AGCATGCGGT GGCGCAGGGG
CTGATCGAAG CGGCGGATCT GACGCAGCTC GGGGCGGTCA TAAATGGTGC CCACCCTGGC
CGTAGCACTG ACGATCAGAT CACCCTTTTT GACGGCACCG GTGTTGGGCT TCAGGATCTG
GCGGTCGCCG CCCGTGTCGT GGAGCTGGCG GTCACGCAGG GCATCGCGAT GGAGGTTGAT
TTCTAA
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| Protein sequence | MYIVPERVIA DLMTREAAFD AVEKVFAAMA AEDAYNFPVV REAIGHEDAL YGFKGGFDRA
GLTLGLKAGG YWPHNLEKRG QINHQSTVFL FDPDTGKAHA MVGGNLLTAL RTAAASSVSI
KHLARDDAKV IGMIGAGHQA TFQLRAALEQ RNFEKVIGWN LHPEMLPNIE AVAAEAGLPF
EAVELDGMRA ADVIISITSS FEASLMADHV SPGTHIACMG TDTKGKQEVD PALLVRAEVF
TDEVAQSVGI GEAQHAVAQG LIEAADLTQL GAVINGAHPG RSTDDQITLF DGTGVGLQDL
AVAARVVELA VTQGIAMEVD F
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