| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2692 |
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| Symbol | |
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| ID | 4077603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2833528 |
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| End bp | 2835003 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008017 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_614686 |
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| Protein GI | 99082532 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.41255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTAT CGGCCCTGTC CGCGCGTGCG GAGATCAGTG ACAAAGCACT CGTGCGTTCG
TTTTCTTACA TCAACGGGAA ATGGTGTGCC TCGTCCAATG GCGAGGTGGT CGCAGTACAT
GACCCGGCCA CGGGCGACTT CATCGGCGAT GTCACGGCCA TGACAGCAGA GGATTCCTCT
GCCGCGGTGG ATGCGGCACA TGCGGCCTTT ACCAGCTGGG CATTGATGCT GCCGCAGGAT
CGCTGCGCCC TATTGCGTCG CTGGTTCGAA CTGATGATCG AGCATAAAGA GGACCTCGCC
CGCCTTATGG TGCTGGAGCA GGGCAAACCC TTGTCGGAGG CCCGCGGCGA GATCGACTAT
GGCGCGGCCT TTGTCGAATT CTATGCCGAG GAATCCAAAC GGCCCAACAT CGAGGGCGTC
ACCAGCCATC TGCCCGATGC GGAGGTGGAA CTCTGGCGCG AACCTGTGGG CGTGGCCGCA
TTGATCACGC CGTGGAATTT TCCCTCTGCG ATGCTGACTC GCAAGGCCGC AGCCGCGCTG
GCGGCGGGCT GCACCGTTGT CGCCCACCCC TCCGCCGAAA CGCCCTTCAG CGCGCTGGCG
CTGGCCGAGC TGGCAGAACG CGCGGGCATT CCCAAAGGCG TCTTCAATGT CATCACAGGC
AAGGCCCCGG TGGTGGTTGA GCCATGGACA CGGGATGCGC GCGTGCGGGC CCTGTCCTTC
ACCGGCTCCA CCGAGGTCGG CAAGCTCCTC TATCGTCAGT CCGCCGAGAC GGTCAAACGT
CTGGTGATGG AACTCGGTGG TCATGCTCCG GTGATCGTTT TCAAAAACTG CGATCTCGAT
CGTGCCGTCG CCGAAACGAT CAAGGCGAAA TTCGCCACCT CCGGGCAGGA TTGCCTTGGC
GCCAACCGCA TCTTTGTCGA GCGGGACATT TATGATGAGT TCTGCACCCG ATTTGTGGCG
GCGACGCAGG CGCTCAGCGT GGGCAAGGGG ATTGATGATC CCGATATCGG CCCGCTGATG
AACGAAAAAG CGGTGCAGAA ACAGGAAGAG CATGTCGCTG ACGCATTGGA AAAAGGCGCC
ACATTGGCCT GCGGCGGCAA ACGCCACGCG CTGGGGCCGC TGTTTTATGA ACCCACCGTG
CTGACGGATG TCCCCGCTGA CGCGCTGATC CTGCACGAAG AGACCTTCGG CCCGGTCGCG
CCGATCACGC CGTTTGACTC TGAGGACGAG GTGATCCAGC GTGCCAATGA CAGCGAATAT
GGGCTTGTCG CCTATGTCCA CAGCCATGAT CCGCGCCGGA TCTATCGCCT GAGCCGCGCC
TTGCAGTTCG GCATGGTGGC GGTCAACCGA ACCAAAGTCA CCGGCGCGCC GATCCCCTTT
GGCGGCACCA AACAATCCGG CATGGGCCGC GAGGGCGCAC GGCTGGGCAT GGAAGAATTC
ACCGAGGTCA AATACGTCTG CCGCGACTGG GCGTAA
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| Protein sequence | MSLSALSARA EISDKALVRS FSYINGKWCA SSNGEVVAVH DPATGDFIGD VTAMTAEDSS
AAVDAAHAAF TSWALMLPQD RCALLRRWFE LMIEHKEDLA RLMVLEQGKP LSEARGEIDY
GAAFVEFYAE ESKRPNIEGV TSHLPDAEVE LWREPVGVAA LITPWNFPSA MLTRKAAAAL
AAGCTVVAHP SAETPFSALA LAELAERAGI PKGVFNVITG KAPVVVEPWT RDARVRALSF
TGSTEVGKLL YRQSAETVKR LVMELGGHAP VIVFKNCDLD RAVAETIKAK FATSGQDCLG
ANRIFVERDI YDEFCTRFVA ATQALSVGKG IDDPDIGPLM NEKAVQKQEE HVADALEKGA
TLACGGKRHA LGPLFYEPTV LTDVPADALI LHEETFGPVA PITPFDSEDE VIQRANDSEY
GLVAYVHSHD PRRIYRLSRA LQFGMVAVNR TKVTGAPIPF GGTKQSGMGR EGARLGMEEF
TEVKYVCRDW A
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