| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2689 |
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| Symbol | |
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| ID | 4077600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2828383 |
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| End bp | 2829603 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008014 |
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| Product | allantoate amidohydrolase |
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| Protein accession | YP_614683 |
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| Protein GI | 99082529 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0667838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGG GACAGGAAGC CCAGCAACGC CTGGCGAAGA TTGCGGCCTG CAGCGCAGCC
GGACCCGGTG TAACCCGCCT GCCCTATACG CCCGAACATT CCGCAGCACT GGAACAGATC
AGCGACTGGA TGCGGCGCGC CGGGCTCCAC CCACAGCTTG ATGCGGCCGC GACCCTGGTG
GGGCGCAGCA GTGCGCCCTC CAACGAAGCC GCCGTTCTGA TCGGGTCGCA TCAGGACAGC
GTGATCGAAG GCGGGCGCTA TGATGGCATC ATGGGGATTG TGATCGGCTG TCTGGCGCTT
GAACGGCTGG CATCCGAAGG CACGCGACTC CCCTTTCCGG TCGAGGTACT GGCCTTTGCC
GACGAGGAGG GCGTGCGCTT TCCCACCGCT CTTGTTGGCT CCCGCGCCCT TGCGGGCCGT
TTCGACCCCA GCGTTCTGGA CATGCGCGAC GGCGAGGGCG TGACGCTCCG CACCGCGCTG
TCGGAGTTTG GGGGCAGACC CGATAAAATC GCCTCTGAAG CCCGCAACAA GAACGCGGTG
CGCGCTTATC TGGAACTTCA CATCGAGCAA GGTCCGATGC TGGAGCAGGA CAACGCAGCG
GTTGGAATCG TCACTGGCAT CTGCGGTATC GAGCGCAACA GCGTTTCATT TGTCGGGGAG
ACCGGCCATG CGGGCACCGT CCCGATGCAG GGGCGGCGCG ATGCGCTGGT GGCCGCGTCC
GAGTTCGTGG TGAAAATCCA TGATGCCGCA CGAAACATCG ATGGGCTGCG CGCCACCATT
GGCACGCTGG CGCTGAAACC GGCAGCCGTG AACGCCATCC CGCGCGAGGC GGCGCTGACG
CTTGAGATCC GGGCGCTTTC GGATGCGGCG CGACAGGAAT TTGCCGGTGC CGCGCAGGTC
ATCGGCACCG AAATCGCTGC CAAACGGGAT GTGAGCTTTG ACATGGCAAA AACCTACGAG
CAACTCGCCG TGCCCTGCGC ATCGGGGTTG ATCGAAACGC TGGAGCTGGC CGCCCGGGAT
GCCGGACAAC ACGCACCCCT GCTGCCCTCG GGGGCGACGC ATGATGCCTC AGCGATGGCG
GATCTATGCG ACATTTCAAT GCTGTTCCTG CGCTGTAAAG ACGGGTTCAG TCACCGCCCG
GAGGAATATA CCTCTGCCGA GGACATGGCG GCAGCGATTG ATGTTACCTG CGCTTTCCTG
CGCCGTCTTG CCGCGGAGTA G
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| Protein sequence | MDWGQEAQQR LAKIAACSAA GPGVTRLPYT PEHSAALEQI SDWMRRAGLH PQLDAAATLV
GRSSAPSNEA AVLIGSHQDS VIEGGRYDGI MGIVIGCLAL ERLASEGTRL PFPVEVLAFA
DEEGVRFPTA LVGSRALAGR FDPSVLDMRD GEGVTLRTAL SEFGGRPDKI ASEARNKNAV
RAYLELHIEQ GPMLEQDNAA VGIVTGICGI ERNSVSFVGE TGHAGTVPMQ GRRDALVAAS
EFVVKIHDAA RNIDGLRATI GTLALKPAAV NAIPREAALT LEIRALSDAA RQEFAGAAQV
IGTEIAAKRD VSFDMAKTYE QLAVPCASGL IETLELAARD AGQHAPLLPS GATHDASAMA
DLCDISMLFL RCKDGFSHRP EEYTSAEDMA AAIDVTCAFL RRLAAE
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