| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2685 |
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| Symbol | |
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| ID | 4077596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2824082 |
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| End bp | 2825029 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008010 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614679 |
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| Protein GI | 99082525 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000049983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.670386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCT ATATTTTGAA ACGGCTTATT TCGGCGGTGC CGGTCCTCTT GGGGATCTCG
GTCATCGTGT TTCTGATCAT GGCGATGATC CCGGGCGACC CGGCCACGGC GATCCTTGGG
TCCTATGCGA CGCCCGAGAA TGTGGAGAAG CTCAATCGCG ATCTCGGTCT CGATAAGCCC
CTGGTGCAGC GGTACTTTAT CTGGCTCGGC AATATGTTGC AGGGCGATTT TGGCCGCAGT
TTCTCGCTCA ATCGTGCGGT GCTCGACGAG GTGCTGGAGC GGTTCAATGC AACGCTGGTG
CTGGCGGGCA CATCCTTTGT GATCTGTTCG ATCCTTGGCG TTGCGGCAGG TGTGGTCTCG
GCGGCGCGCC AGTACGGGCT GGCGGATAAG GCGATCACCT TTGCAGTGCT TCTGGGCATT
TCGATTCCGT CGTTTTTCCT CGGCATGATG ATGATCCTGA TCTTTGCGGT GAATCTGCGC
TGGTTTCCGG TGTCCGGCAT GTGGCCGATC TACGGCGCGC GGGATCTCTC GGCCCTTGTC
AGTCATTTGA CACTTCCCGC CATTGCGCTG GCGGTGGTGG CCACTGGCGT CATCGCGCGC
TTGTCTCGGT CCGCCATGCT GGAGGTCCTA CGACAGGATT TCATCCGCAC AGCGCGCGCC
AAAGGCGTGC ATGAACGCAG CGTGATCTGG CGCCATGGTC TGCGTGCGGC GATGGTGTCG
ATCATCCCGG TGCTGGGCAT TCAAGCCGGG TTTGTGCTCT CGGGCGCGGT CTATATCGAG
ATGGTGTTTC AATGGCCCGG CGTCGGGCGG ATGCTGGTCG ATGCCATCCT AAAACGTGAC
ATTCTGTTGG TGCAGGGCGG TGTGGTCTTT GTGGCTGCTT GCTATGTGCT GTTCAACATC
GCCGTCGATG TCGCCCAAAG CCTTCTGGAC CCGAGGATCA AGGCATGA
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| Protein sequence | MTGYILKRLI SAVPVLLGIS VIVFLIMAMI PGDPATAILG SYATPENVEK LNRDLGLDKP
LVQRYFIWLG NMLQGDFGRS FSLNRAVLDE VLERFNATLV LAGTSFVICS ILGVAAGVVS
AARQYGLADK AITFAVLLGI SIPSFFLGMM MILIFAVNLR WFPVSGMWPI YGARDLSALV
SHLTLPAIAL AVVATGVIAR LSRSAMLEVL RQDFIRTARA KGVHERSVIW RHGLRAAMVS
IIPVLGIQAG FVLSGAVYIE MVFQWPGVGR MLVDAILKRD ILLVQGGVVF VAACYVLFNI
AVDVAQSLLD PRIKA
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