Gene TM1040_2671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2671 
Symbol 
ID4077582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2806342 
End bp2807274 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID638007995 
Productalpha/beta hydrolase fold 
Protein accessionYP_614665 
Protein GI99082511 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGGT TCCTCAGCGC AGTGCTCTGT CTGGGGGCGC TGCTGTTTTT GCCCGCCCTT 
CAGGAGACCC TGCGTCGGCC GCTTACCGAG TCGATGCGCC GCAACGCACC GGGTAAGTTT
GCGGAGCTAT CCCAGGGGCA GACGCATTAT CGCTGGATCG GTCCCTTGCG CGGGCCGGTG
GTGGTTTGCG TGCATGGCAT CACCACCCCT TCCGAGAGCT TTTTGCCGCT GGCGCAGGAA
CTGGCCGAGA TGGGCTATCG GGTGCTTCTG TATGATCTCT ATGGGCGGGG CTATTCCGAC
TATGTGCCGG GGCTACAGGA TCGGGCGTTT CTGCTGCAAC AGCTTGATGA CCTGCTGGCC
TATGAGGGGA TTGTCGAGGA CTTCGTCCTG GTGGGCCATT CTGCGGGCGG GGCCATTGCC
ACCGCCTTTG CGGCGGCAAA TATCTGGCGT GTGCGCAGTC TGATCCTTGT CACCACCGTC
GGGCTGCACA AGCCGCGCAC CCCCATGGCA GAGTTTCGAA AGCACGCCCA TGGCATTCAG
GACCTGATCC TGCGCTGGAG CTATCCGATC GTTGCCAGAC GCTATGTCAA AGGCGTCTTT
TCCGACCCGC GCACCCCCGA CGCCGTGCGA CAGGCGCAGC AGGCACAACT GAGCCGGCGC
GGCTATATGC CGTCAAACCT CGCCGCGATC CGCGGTATTC TGCGCGATGA TTTTGCCGAG
GAACAAAAGC TCTTTAACCG ACAGGGTCTG CCGGTTCTGG CGATCTGGGC GCGCGATGAC
GTGATTATCC CACCGCAGAC CAGCGGCCGT CTGGCAGAAC TGAACCGATC TGCCAAACAG
GAGGTGGTCG AGGATGCAGG CCACGAGGTG GTCTACACCC ATGCCGGGGA CGTGGCTCGC
CTGATCGCGG AGAACCAGCG CCGCGGGCTC TGA
 
Protein sequence
MIWFLSAVLC LGALLFLPAL QETLRRPLTE SMRRNAPGKF AELSQGQTHY RWIGPLRGPV 
VVCVHGITTP SESFLPLAQE LAEMGYRVLL YDLYGRGYSD YVPGLQDRAF LLQQLDDLLA
YEGIVEDFVL VGHSAGGAIA TAFAAANIWR VRSLILVTTV GLHKPRTPMA EFRKHAHGIQ
DLILRWSYPI VARRYVKGVF SDPRTPDAVR QAQQAQLSRR GYMPSNLAAI RGILRDDFAE
EQKLFNRQGL PVLAIWARDD VIIPPQTSGR LAELNRSAKQ EVVEDAGHEV VYTHAGDVAR
LIAENQRRGL