Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2665 |
Symbol | |
ID | 4077576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2800489 |
End bp | 2801121 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007989 |
Product | hypothetical protein |
Protein accession | YP_614659 |
Protein GI | 99082505 |
COG category | [S] Function unknown |
COG ID | [COG1738] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA CCTATCTTCC TGGCGTTCTC GCCATGGCTG CCGTTGTGGT GGCCTCCAAC ATTCTCGTGC AATTCCTGTT CGGCAACTGG CTGACCTGGG GCGCGTTTAC CTATCCCATC GCTTTCCTCG TTACCGATGT GACCAACCGC GTCTATGGCG CAGGCCCCGC GCGCAAGGTC GTGCTGGCCG GGTTTGTGGT CGGCGTGATC TGCTCGCTCA TTGGCACGCA GATTATGGGC GAGTTCGGCC CGCTTGTGAC CCTGCGCATC GCGGTGGCCT CTGGTCTGGC GTTCCTTTTG GCGCAGCTCA CGGATGTGGC GATCTTTGCC AGCCTGCGCG GCGGCAAATG GTGGCGCGCG CCGTTGGCCT CGACGCTGAT TGGCTCTTCG CTTGATACCG CGATCTTTTT CACCATCGCC TTCTCCGGCG CGCTGACCTT CCTTGAGCCC GCAAATGACG TCTCCTGGGC CGGTGAAATG CTGCCGCTTC TGGGCGCTGG TCCGGTTGCG CCCCTGTGGG TGTCGCTCGC CGTGGCCGAC TGGCTGGTGA AACTGTCGCT GGCGCTGATC GCGCTGATCC CCTTCCGCCT GATTGTTGCG CGTTTAACGC AGGGCCAACC CAGCAAAGCG TGA
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Protein sequence | MTRTYLPGVL AMAAVVVASN ILVQFLFGNW LTWGAFTYPI AFLVTDVTNR VYGAGPARKV VLAGFVVGVI CSLIGTQIMG EFGPLVTLRI AVASGLAFLL AQLTDVAIFA SLRGGKWWRA PLASTLIGSS LDTAIFFTIA FSGALTFLEP ANDVSWAGEM LPLLGAGPVA PLWVSLAVAD WLVKLSLALI ALIPFRLIVA RLTQGQPSKA
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