| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2645 |
|---|
| Symbol | |
|---|
| ID | 4077948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2778782 |
|---|
| End bp | 2779843 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638007969 |
|---|
| Product | A/G-specific DNA-adenine glycosylase |
|---|
| Protein accession | YP_614639 |
|---|
| Protein GI | 99082485 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACC ACCCCGTGTC TGCCGAGCAA CTGAGCCAGG ATCTCTTGGT GTGGTACGAT
ACCCACGCCC GCGAGATGCC ATGGCGCGTC GGCCCAGCCG CGCGCGCCTC CGGTGTGCGC
CCCGATCCCT ACCGGATCTG GCTCAGCGAG GTCATGCTGC AACAAACCAC CGTCGCCGCC
GTCAAAGACT ATTTCGAACG GTTCACCCGG CGCTGGCCCC GCGTCGGCGA CCTGGCCGCT
GCCGAGGACG GCGATGTTAT GGCAGAGTGG GCGGGGCTCG GCTATTACGC CCGCGCGCGC
AACCTGTTGA AATGTGCCCG CGTGGTGGCG GAGGAGTTTG AGGGTGTGTT TCCAGATGCC
TATGAGGGGC TGATCGCACT GCCCGGCATC GGGCCTTATA CGGCAGCGGC GATCTCTGCC
ATTGCCTTTG ACCGGCCCGA GACGGTGCTT GATGGCAATG TGGAACGGGT GATGGCGCGG
CTTCATGACG AACACGAACC GCTTCCGGCA GTGAAACCCG TGCTCAAGGC GCATGCCGCC
CATTTGACGC CCAGCGCGCG GCCCGGCGAC TATGCGCAAG CGGTGATGGA TCTCGGGGCC
ACCATCTGCA CGCCCAAATC GCCCGCGTGC GGCATCTGCC CCTGGCGCGA TCCCTGCCGC
GCCCGCGTCA AGGGCACCGC GCCCGAACTG CCCAAGAAAA CGCCCAAGAA ACCCAAACCC
ACCCGCTATG GGTTTGTCTA TCTGGCGCGC AGTGCCGAAG GCGACTGGCT CCTCGAGCGC
CGCCCCGACA AGGGGCTTTT GGGGGGGATG CTGGGCTGGC CCGGTTCAGA GTGGAACGAC
GCTCCCACCG AGACGCCGCC CTTTGATGCC GACTGGCAGG ATCTGGGCGC CGAGGTCCGT
CACACCTTCA CCCATTTCCA CCTGATCCTG CAGGTGCGCA GCGCCGAGCT GCCCGCGGAT
TTTGAGCCCC GCGCAGGTCA GGAACTGGTC CGACGCCACG ACTTCCGCCC CTCCAGCCTG
CCCACCGTCA TGCGCAAGGC CTTTGATCTG ACGCACCGTT AA
|
|---|
| Protein sequence | MRDHPVSAEQ LSQDLLVWYD THAREMPWRV GPAARASGVR PDPYRIWLSE VMLQQTTVAA
VKDYFERFTR RWPRVGDLAA AEDGDVMAEW AGLGYYARAR NLLKCARVVA EEFEGVFPDA
YEGLIALPGI GPYTAAAISA IAFDRPETVL DGNVERVMAR LHDEHEPLPA VKPVLKAHAA
HLTPSARPGD YAQAVMDLGA TICTPKSPAC GICPWRDPCR ARVKGTAPEL PKKTPKKPKP
TRYGFVYLAR SAEGDWLLER RPDKGLLGGM LGWPGSEWND APTETPPFDA DWQDLGAEVR
HTFTHFHLIL QVRSAELPAD FEPRAGQELV RRHDFRPSSL PTVMRKAFDL THR
|
|---|
| |