| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2642 |
|---|
| Symbol | lpxK |
|---|
| ID | 4077945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2776433 |
|---|
| End bp | 2777434 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638007966 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_614636 |
|---|
| Protein GI | 99082482 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.809366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGC CTGAATTCTG GAACAAACCG CCCAGCCACT TTGACCTGCG CGCCTGCCTG
CTGTCGCCGC TGGGCGCTCT TTATGCCAAA GGCACTGCCA CGCGGCTGCG CAAGGGCGCG
CCCACACGGG CGCCAGTGCC GGTGATCTGT GTCGGCAATC TCAATGCAGG TGGCACCGGC
AAAACCCCGA CCGTGATCTG GCTGATGGAG CAACTGGGCG CTGCCGGCCA CGAGGTCCAT
GTGGTCTCGC GCGGCTATGG CGGGCGCCTT GAGGGGCCCG TTCAGGTGGA CCCGCGCCGC
CACAGCGCCG CCGATGTCGG TGATGAGCCG CTGCTGATGG CTGCCTTTGG CGAGGTCTGG
GTCGCCAGAG ATCGCGGCGC GGGCGTCACC GAGGCCGCAG CTGCCGGAGC CTCGGTAATC
GTGATGGATG ACGGGTTTCA GAACCCCTCG GTGGCCAAGG ATTTCTCCAT CATCGTGGTG
GACGCCAAAC GCGGCTTTGG CAACGGGCGC TGCCTGCCTG CGGGGCCGCT GCGCGAGCCG
GTTGCCACCG GCCTCAGCCG CGCCGATCTG GTGCTGTCGC TGGGCGATGC GCGCGCACAA
GAGACGTTTC AATCCATCTG GGGCGCAGAG ATCCCGGTGC CCCACCTCAC CGGCCATGTG
GAGCCGCTGC CCACCGGCAT GCCATGGCAG GGCACCAAGG TGCTGGCTTT TGCGGGCATC
GGCCATCCAG AGAAATTCTT TGCCACACTG CGCGGACTGG GCGCCGAGCT TTGCCGGGCC
GAGGCGCTCG AGGATCACCA GACGCTTGCG CCCGCGCTCC TCACCCGTCT CGAACAGGAG
GCACGCCTTC TGGGTGCGCA GCTGGTCACA ACCGAAAAGG ACGCCGTGCG CCTGCCGCTG
AGCTTTCGGC CCAAGGTCAT CACCCTGCCG GTGCGCCTGC GGGTCGCGCA GGGCGACACG
CTTCTGGCCC GCCTCAAAGA CATCGCGCCG CCCCCCGACT AG
|
|---|
| Protein sequence | MRPPEFWNKP PSHFDLRACL LSPLGALYAK GTATRLRKGA PTRAPVPVIC VGNLNAGGTG
KTPTVIWLME QLGAAGHEVH VVSRGYGGRL EGPVQVDPRR HSAADVGDEP LLMAAFGEVW
VARDRGAGVT EAAAAGASVI VMDDGFQNPS VAKDFSIIVV DAKRGFGNGR CLPAGPLREP
VATGLSRADL VLSLGDARAQ ETFQSIWGAE IPVPHLTGHV EPLPTGMPWQ GTKVLAFAGI
GHPEKFFATL RGLGAELCRA EALEDHQTLA PALLTRLEQE ARLLGAQLVT TEKDAVRLPL
SFRPKVITLP VRLRVAQGDT LLARLKDIAP PPD
|
|---|
| |