| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2627 |
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| Symbol | |
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| ID | 4077930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2759858 |
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| End bp | 2761072 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007951 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_614621 |
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| Protein GI | 99082467 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.800354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGA CCGCGCCCTC GCCCCCAGCC CCAGCCTCTG CCCCCGGCTC CGATCCCGGT
TCTGATCCCG GCCCTGCCCA CGTCCGGCCC CCCGGACGGG ATGCAACACA AGGCCCGCGC
CTGTTGTTCT TTTCCGGTGG CACGGCCCTC AACGAGATCT CGCGCAGGCT CAAGGCCTAC
ACGCAGAACT CGGTGCATCT GATTACACCC TTCGACAGCG GTGGCTCATC GCAGGTGCTG
CGCAAAGCCT TTGGCATGCC CGCGGTCGGC GACCTGCGCA GTCGACTTAT GGCGCTGGCG
GATGAAACCG ATAGAGGCCA GCCAGAGATC CTGCGCCTGT TCACCCATCG CTTTGCAAAA
CACGCGTCAG AGCGGAATGT GACACAGGAC GCTGCCCGGC TCTTTGAGGG CACGCATCCG
CTTTTGCAGG GGATTCCAAC GCCGGTACGA CAGCAAATCC GCGAAGACCT GCGCCAGTTT
CAGGACGCCG CCCCGGCGGA TCTGGACTAT CGCAACGCCA GCATCGGCAA CCTGATCCTC
GCGGGGGGCT ATCTGCGTCA CGGCCGCCAG CTTGAGCCGG TGCTTGCCCA GATGTCGCGG
ATGGTGGCGG TGCGCGGCAC CGTGCGCCCG ATTGCGGATG TGAACCTGGA GATCGGTGCA
GAGCTTCGGG ACGGGCGGCG CGTCATCGGT CAGCGCCGGA TGACGGGCAA GGAGCACGCA
CCGCTCACCA GCCCTATCGC GCGCCTCTTT CTGTCAGATG GCACCCGCGA ACTGCCTGCG
GATGCGGTGC CCCTCCCGCA AAGCAACCAA GACCTCATCG CCGGGGCGGA CCTGATCTGC
TACCCGCCCG GCAGTCTCTA TTCGAGCGTG ATCTGCAATC TCCTGCCCAA AGGTGTGGGC
CAGGCCATTG CCGCGCGCAA CGTGCCAAAG GTCTATGTCC CAAGCCTCGG CACAGATCCG
GAATGTCTGG CGATGACGCT CTCGGATCAG ATCTCTGCCT TACTGGCACC GCTGCGCCGG
GACGCTGGTG ATGTGGCCAC CTCAGCCTTT CTCAGCCATG TGATCTGTGA CCTCAGCGTG
TCAGAGGCGG CACGCGCAGA GGTCCTGCGC GATCACGGCA TCCCCTGCAT CGCGCGGCCT
TTGGCGGTCT CTTCGGGCAA GTCGCCCTGC TATGCGCCGG ATGCCCTCTG CAGACAGCTA
CTGGCACTGG CCTGA
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| Protein sequence | MSKTAPSPPA PASAPGSDPG SDPGPAHVRP PGRDATQGPR LLFFSGGTAL NEISRRLKAY
TQNSVHLITP FDSGGSSQVL RKAFGMPAVG DLRSRLMALA DETDRGQPEI LRLFTHRFAK
HASERNVTQD AARLFEGTHP LLQGIPTPVR QQIREDLRQF QDAAPADLDY RNASIGNLIL
AGGYLRHGRQ LEPVLAQMSR MVAVRGTVRP IADVNLEIGA ELRDGRRVIG QRRMTGKEHA
PLTSPIARLF LSDGTRELPA DAVPLPQSNQ DLIAGADLIC YPPGSLYSSV ICNLLPKGVG
QAIAARNVPK VYVPSLGTDP ECLAMTLSDQ ISALLAPLRR DAGDVATSAF LSHVICDLSV
SEAARAEVLR DHGIPCIARP LAVSSGKSPC YAPDALCRQL LALA
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