| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2620 |
|---|
| Symbol | |
|---|
| ID | 4077923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2752842 |
|---|
| End bp | 2753300 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638007944 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_614614 |
|---|
| Protein GI | 99082460 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.955931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAA ATGATGATTT TGCGGTGCAG GATTTTCTGC CGTTTCTGCT CAACCGAGCG
GCAGAGGATT CCTCGCTGGA GTTTCAGAAG CTCTACAAGG GGCGGTATGG GATGTTGCGG
ACGGAATGGC GGGTGCTGTT TCATCTGGGG ATGTACACCC GCATGACCGC CAGCGACATC
AGCCAGCGCG CCAGGATCCA CAAGACCAAG ATCAGCCGCG CCGTTGCCAA GCTGGCCGCG
CGGCGCTGGG TCAGTCGTAG TCGCGACGAG TCAGATCGTC GCTCCGAACA CCTGGAGTTG
ACGGCAGCAG GGCGCAGTGT TTACGAGGAT CTGCGACAGC AGGCGCAGGT CTACGATCAG
CGATTGACCC AGGGGTTTTC GGCAGAGGAT GTTGCGCTCT TGCGCCGAAT GTTGCGGCAA
TTGGCCAGCA TGGAGCCGCC GGCTGACCGC ACGCCTTGA
|
|---|
| Protein sequence | MSKNDDFAVQ DFLPFLLNRA AEDSSLEFQK LYKGRYGMLR TEWRVLFHLG MYTRMTASDI
SQRARIHKTK ISRAVAKLAA RRWVSRSRDE SDRRSEHLEL TAAGRSVYED LRQQAQVYDQ
RLTQGFSAED VALLRRMLRQ LASMEPPADR TP
|
|---|
| |