Gene TM1040_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2620 
Symbol 
ID4077923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2752842 
End bp2753300 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID638007944 
ProductMarR family transcriptional regulator 
Protein accessionYP_614614 
Protein GI99082460 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.955931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA ATGATGATTT TGCGGTGCAG GATTTTCTGC CGTTTCTGCT CAACCGAGCG 
GCAGAGGATT CCTCGCTGGA GTTTCAGAAG CTCTACAAGG GGCGGTATGG GATGTTGCGG
ACGGAATGGC GGGTGCTGTT TCATCTGGGG ATGTACACCC GCATGACCGC CAGCGACATC
AGCCAGCGCG CCAGGATCCA CAAGACCAAG ATCAGCCGCG CCGTTGCCAA GCTGGCCGCG
CGGCGCTGGG TCAGTCGTAG TCGCGACGAG TCAGATCGTC GCTCCGAACA CCTGGAGTTG
ACGGCAGCAG GGCGCAGTGT TTACGAGGAT CTGCGACAGC AGGCGCAGGT CTACGATCAG
CGATTGACCC AGGGGTTTTC GGCAGAGGAT GTTGCGCTCT TGCGCCGAAT GTTGCGGCAA
TTGGCCAGCA TGGAGCCGCC GGCTGACCGC ACGCCTTGA
 
Protein sequence
MSKNDDFAVQ DFLPFLLNRA AEDSSLEFQK LYKGRYGMLR TEWRVLFHLG MYTRMTASDI 
SQRARIHKTK ISRAVAKLAA RRWVSRSRDE SDRRSEHLEL TAAGRSVYED LRQQAQVYDQ
RLTQGFSAED VALLRRMLRQ LASMEPPADR TP