| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2607 |
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| Symbol | rpsP |
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| ID | 4077518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2743178 |
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| End bp | 2743543 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007931 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_614601 |
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| Protein GI | 99082447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.152085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0124083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGA AAATCCGTTT GGCCCGCGGC GGCTCCAAAA AACGCCCCTT CTACCGCATC
GTTGCAGCGG ACTCCCGCAT GCCGCGTGAC GGCCGCTTCA TCGAGAAGCT GGGCACCTAT
AACCCGCTCC TGCCGAAAGA CAGCGAAGAG CGCGTGAAAA TGGACATCGA AAAGATCCAG
GCATGGCTCG ACAAAGGCGC ACAGCCCACC GACCGTGTGG CTCGTATGCT CGAGGCGGCT
GGCGTGCGCG AGAAAACCGA GCGCAACAAC CCCAACAAAG CGAAGCCGGG CAAGAAAGCT
CAGGAGCGCG CTGAAGAGAA AGCCGCCAAG GCAGCAGAAG CCGCCGAAGC AGCAGACGCG
GAATAA
|
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| Protein sequence | MAMKIRLARG GSKKRPFYRI VAADSRMPRD GRFIEKLGTY NPLLPKDSEE RVKMDIEKIQ
AWLDKGAQPT DRVARMLEAA GVREKTERNN PNKAKPGKKA QERAEEKAAK AAEAAEAADA
E
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