| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2599 |
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| Symbol | |
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| ID | 4077510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2736583 |
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| End bp | 2737461 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007923 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614593 |
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| Protein GI | 99082439 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00513186 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAAAATT GGGATGAGGT ACGCACCGCC TATCAGGTGG CGCGCTTGGG CACTGTGAGT
GGTGCAGCAG ATGTTCTGGG CGTGCATCAC GCCACGGTGA TCCGGCATAT CGACGCGATC
GAAGCCCGAC TGGGCGTGAA GCTGTTCCAG CGACATGCCC GTGGGTATAC GGCCACCGAG
GCCGGTCTTG ACCTGTTGCG GGTGGCGCAG GCCACGGACG ATCAGTTCAG CCAACTGGTC
GGGCGCCTCA AGGGGCAGGG CGATGAGGTC TCTGGGGAGC TGGTGGTGAC ATCCCTGTCG
TCCATGGCGC CAATGTTGGC GCCGGCGCTT GCAGAGTTTC AGCAGCTGCA TCCTGATCTT
GTGATCCGCT ATCTGACCGG GGATCGCCTG TTCCGGCTGG AATATGGCGA GGCGCATGTG
GCGTTGCGCG CGGGCGCTGC CCCCGAGCAG CCCGACAATG TTGTGCAGCC CTTCGTGGCC
CAGCGGCTCG CGCTCTATGC CTCGCGCGAG TACGTCGAGC GCCATGGCAT GCTGAAGGGG
CAAGATGACA TGGTGAACCA TCGTTTTATT GCCAGCGACA ATGAGAATAC GCGCGCGCCC
TTCGAGCGCT GGTTGCGTTC CACGATCCCG GCCGAGAATA TCGTCTTTCG CTGCTCTGAC
GCCGTGGCTG GGCATCAGGC CATTCGGGCA GGGGCTGGGA TCGGGTTTGT CTCCCTCTGG
GAGGCGGCAA GCAGTCCTGA TCTGGTGATG ATGATGGATC CCCACGATGA GTGGTCGGGC
AAGATCTGGC TCGTGACCCA TGTGGATCTC CACCGCACCA ACAAGGTGCA GAGTTTTGTG
CGCTTCTTGA AAGAGCACGC CAAATCCTGG CCGCAGTGA
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| Protein sequence | MENWDEVRTA YQVARLGTVS GAADVLGVHH ATVIRHIDAI EARLGVKLFQ RHARGYTATE
AGLDLLRVAQ ATDDQFSQLV GRLKGQGDEV SGELVVTSLS SMAPMLAPAL AEFQQLHPDL
VIRYLTGDRL FRLEYGEAHV ALRAGAAPEQ PDNVVQPFVA QRLALYASRE YVERHGMLKG
QDDMVNHRFI ASDNENTRAP FERWLRSTIP AENIVFRCSD AVAGHQAIRA GAGIGFVSLW
EAASSPDLVM MMDPHDEWSG KIWLVTHVDL HRTNKVQSFV RFLKEHAKSW PQ
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