Gene TM1040_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2592 
Symbol 
ID4077503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2731997 
End bp2732542 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID638007916 
ProductF0F1 ATP synthase subunit B' 
Protein accessionYP_614586 
Protein GI99082432 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00059476 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTA CTACGCATGA CGCAGGTCAT GGAGCTGCCG AAGCGGCGCA CGGGTCTTCC 
GGCATGCCGC AGCTGGACTT CTCGACCTAC GGAAACCAGA TCTTCTGGCT TCTGGTCACG
CTTGTCGTGA TCTATCTGAT CCTGTCGCGC ATTGCGCTGC CCCGTATTGC AGCCATTCTG
AACGAGCGTC AGGGCACTAT CACAAACGAC CTCGCCGCAG CCGAAGACCT GAAGGCCAAA
GCTGTCGAGG CGGAAAACGC TTATAACAAG GCACTGGCCG ACGCCCGCGC GGAAGCGCAG
CGCATCGCCG CCGAAACCCG CGCCGAAATT CAGGCCGAGG TGGACGAGGC AATCGCAAAG
GCGGATGCGG AAATCTCTGC AAAAGCAGCA GAGTCCGAGA AAGCCATTGC TGAAATCCGC
GCTGGCGCGC TCGAGAGTGT CAAGGTTGTC GCCGCCGATA CCGCATCTGC ACTGGTTGCG
GCGCTGGGTG GCAAAGACGA CGCAGACGCT GTCAAAGCAG CCGTCGCTGA ACGGACGGAG
GGCTGA
 
Protein sequence
MATTTHDAGH GAAEAAHGSS GMPQLDFSTY GNQIFWLLVT LVVIYLILSR IALPRIAAIL 
NERQGTITND LAAAEDLKAK AVEAENAYNK ALADARAEAQ RIAAETRAEI QAEVDEAIAK
ADAEISAKAA ESEKAIAEIR AGALESVKVV AADTASALVA ALGGKDDADA VKAAVAERTE
G