| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2586 |
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| Symbol | |
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| ID | 4077497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2723401 |
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| End bp | 2724597 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007910 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_614580 |
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| Protein GI | 99082426 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000443653 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGTGC TGCCCAGCCC CAACGCGGTC TTGCACCGTA TTGCCCTCAT CACCCTCCTG
AGCGCGCCCA GCCTCGCCGC GGCGCAATGT GGCGGAAATT TTCAAAACTT TGTGCGCGGC
CTCAAGGACG AAGCGGTCTC TGCGGGCTAT GCAATCAACA CCGTCAACGA GTTTTTCAAC
GGTGTATCGC AGGACCAAAA GGTGCTGCGT GCAGATCGCT CACAAGGTGT ATTCCAAAAA
CCATTCATTG AATTTTCGCG CCGCCTTATT TCGCAGGATC GCCTCAATCG AGGTCGCCGC
AAAGGCGAGG AATTCGACAA GATCTTCGAG CGGATCGAAA CCACCTATGG CATCAATCGC
GGTGTTCTGC TGGCGTTCTG GGCGTTTGAA ACCGATTACG GCGCCTTTCA GGGAGATTTC
AACACGCGTA ACGCGCTGGT GACCCTGGCC CATGACTGCC GCCGCCCCGA GCTCTTTCGC
CCACAGATTT TCTCGGCGCT GGAGCTATAC CGTAAAGGCG ATTTCGACCC TGAGCGCACC
ACGGGTGCCT GGGCCGGTGA GATCGGCATG GTGCAGATGC TGCCAGGCGA CATCCTGGAA
CACGGGGTCG ATGCGGATGG CGACGGCCAT GTGACGCTCA AGACCTCTGC CGCCGATGCG
CTGATGTCGG CCGCTCGCAT GCTCTCGCAT CTGGGTTGGC GCGCCAATGA GCCATGGCTG
CAGGAGGTTG AAATCCCGGC GGGCATGGAT GTCTCTGCCT CAGGCCCGGC CTATAAGCAA
TCCGTCGCCG AATGGAGCGC GATGGGCGTG GCCCCCCGGA GTGGGGGATT TGCGATGAAA
GAGGCACAGG CCTCCTTGCT GCTGCCGCAG GGCCACAATG GCCCCGCGTT TCTCGCCTAC
CCCAATTTTG ACATTTATTT CGAATGGAAT CAAAGCTTTA CCTACGTACT GACAGCCGCG
TATTTCGCCA CCCGGCTTGA GGGCGCACAG GTGTATGACG CCGGAAATCC CGATCAGGGA
CTGTCGGGTG ATCAGATGAA AGAGCTGCAA CGTCGCTTGC AAGCGCGCGG GCATGACGTC
GGTGACGTGG ACGGCATCCT CGGCGCCAAC ACCCGGCTTG CGGTTCAAAA GGAGCAGTTG
CGTCTCGGCA TGCCCGCGGA TGCATGGCCC ACGCCAGCCC TCCTGAACGC GCTTTGA
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| Protein sequence | MRVLPSPNAV LHRIALITLL SAPSLAAAQC GGNFQNFVRG LKDEAVSAGY AINTVNEFFN
GVSQDQKVLR ADRSQGVFQK PFIEFSRRLI SQDRLNRGRR KGEEFDKIFE RIETTYGINR
GVLLAFWAFE TDYGAFQGDF NTRNALVTLA HDCRRPELFR PQIFSALELY RKGDFDPERT
TGAWAGEIGM VQMLPGDILE HGVDADGDGH VTLKTSAADA LMSAARMLSH LGWRANEPWL
QEVEIPAGMD VSASGPAYKQ SVAEWSAMGV APRSGGFAMK EAQASLLLPQ GHNGPAFLAY
PNFDIYFEWN QSFTYVLTAA YFATRLEGAQ VYDAGNPDQG LSGDQMKELQ RRLQARGHDV
GDVDGILGAN TRLAVQKEQL RLGMPADAWP TPALLNAL
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