| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2560 |
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| Symbol | |
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| ID | 4076691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2703577 |
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| End bp | 2704413 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007884 |
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| Product | signal peptidase I |
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| Protein accession | YP_614554 |
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| Protein GI | 99082400 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0947961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00138454 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGTCGA AAACCAAAAG CGGGAACTCA ATCGTCGAGA CGATCAAGAC CATTGTCTAC
GCCCTGTTGA TTGCCGGTGT CTTCCGCACC CTGTTCTTTC AACCGTTCTG GATTCCGTCT
GGCTCGATGA AGGAGACGCT GCTGATCGGA GATTTCCTCT TCGTCAACAA GATGGTCTAT
GGCTATTCCT ACGCCTCCTG CCCGAATATC CGCCTGAACT CCATCGGGAT CAATATCGAC
GCCAAGGACA TCTGCGGCTT TGTAGACGGG GACAACACCC GTATTTTCGG GGGTGAGCCA
GAGCGCGGCG ACGTTGTCGT ATTCCGTCAT CCCGTAAATG GAACCGACTA CATCAAGCGC
CTTGTGGGGC TCCCGGGTGA CAAATTGCAG ATGAGAGATG GCGTGCTGCA CATCAATGGC
GCGGCAGTTG GTCTGATGGA TGATGGCGAG TTCGAAGAAG CAATGGAGCG CCAGGGGCCT
CAGGGCAGGT TCCCGCGCTG TGAAAACGAC CCCGTTGGTC AGGGCGGCGT CTGCAAGAAA
TCGCGTCAGA TCGAGACGCT TCCGGGCGGC ACCTCGCATG CGATCATCAA CATCGGCAAT
CAGGCCAGCG ACCACACCAA GGTCTATCAT GTGCCAGACG GTCATTTCTT CTTTATGGGG
GATAACCGTG ACAACTCCAC CGACAGCCGG GTGTCCAAGG CAGTGGGCGG TGTTGGCTAC
GTCCCCTTCG AGAATCTGAT CGGGCGTGCA GATCGCATCA TGTTCTCTTC GGCGGGGCGC
TCGATGCTGT TCTTCTGGAC CTGGCGCGGG GATCGCTTCT TTAAGGGCAT CACCTGA
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| Protein sequence | MASKTKSGNS IVETIKTIVY ALLIAGVFRT LFFQPFWIPS GSMKETLLIG DFLFVNKMVY
GYSYASCPNI RLNSIGINID AKDICGFVDG DNTRIFGGEP ERGDVVVFRH PVNGTDYIKR
LVGLPGDKLQ MRDGVLHING AAVGLMDDGE FEEAMERQGP QGRFPRCEND PVGQGGVCKK
SRQIETLPGG TSHAIINIGN QASDHTKVYH VPDGHFFFMG DNRDNSTDSR VSKAVGGVGY
VPFENLIGRA DRIMFSSAGR SMLFFWTWRG DRFFKGIT
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