| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2559 |
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| Symbol | |
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| ID | 4076690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2702681 |
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| End bp | 2703409 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007883 |
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| Product | RNAse III |
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| Protein accession | YP_614553 |
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| Protein GI | 99082399 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.190947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00165454 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCTCAA ATTGTGCCCT CAAGCTGTTC AAAGGACCAC ACGTGAAGCT ATCTCGGGAT
ATCCTCGCCT TTCAGGCAAG GCTGGGGCAT GAATTTTCCA GCCCGGAGCT GTTGATCCGC
GCGCTGACGC ATCCGTCGGT GTCGTCTCCC AATCGGCAGG ATAATCAGCG GCTGGAGTTT
CTCGGGGATC GTGTGTTGGG TCTTGTCATG GCGACGGCGC TTTTGGAACA CGACAAGGAT
GCCACCGAAG GCCAGCTGGC TCCGCGTTTC AATGCGCTGG TGCGCAAGGA AACCTGCGCC
GATGTAGCCC GGCAAATCGA TCTGGGTGCG GTGCTGAAAC TGGGGCGTTC GGAAATGCTC
TCTGGCGGGC GGCGCAAGCA GGCTCTGTTG GGCGACGCGA TGGAGGCGGT GATCGCCGCA
GTTTACCGCG ATGCAGGCTT CGAGGCCGCT CAAAGCGTGA TCCTTCGCCT CTGGGGGAAA
CGTGTGGGCA CCGTCGAAGA AGACGCCCGC GACCCCAAAA CCGCCCTTCA GGAATTTGTG
CAGGCGCGAC GTCAACCGCC GCCTGCCTAT GTATTGGTTG CCCGCAAGGG GCCAGATCAC
GAACCTATCT TTACCATCGC CGCCCGCCTT GAGGACGGCA CCGAGGAGCA GGCCACCGCA
GGCTCCAAAC GCCTCGCCGA ACAGGCGGCC GCCAAGGCCC TCCTGGCCAA ACTGGAGCAA
CAGACATGA
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| Protein sequence | MPSNCALKLF KGPHVKLSRD ILAFQARLGH EFSSPELLIR ALTHPSVSSP NRQDNQRLEF
LGDRVLGLVM ATALLEHDKD ATEGQLAPRF NALVRKETCA DVARQIDLGA VLKLGRSEML
SGGRRKQALL GDAMEAVIAA VYRDAGFEAA QSVILRLWGK RVGTVEEDAR DPKTALQEFV
QARRQPPPAY VLVARKGPDH EPIFTIAARL EDGTEEQATA GSKRLAEQAA AKALLAKLEQ
QT
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