| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2558 |
|---|
| Symbol | era |
|---|
| ID | 4076689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2701779 |
|---|
| End bp | 2702684 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638007882 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_614552 |
|---|
| Protein GI | 99082398 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.693757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00166668 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC GCGCAGGCTT TATCGCCCTC ATAGGCGAGC CAAACGCCGG GAAATCCACG
CTGCTCAACC GGATGGTCGG CGCCAAAGTC TCGATCGTGA CCCACAAGGT TCAAACCACC
CGGGCGCGCA TTCGCGGTGT TGCCATGGAA GGCGACAGCC AGCTTGTTTT TGTCGACACG
CCGGGCCTGT TTCAGCCGCG CCGCCGGCTC GACCGTGCGA TGGTGGCAGC AGCCTGGGGC
GGGGCTGCGG ATGCAGATGT GATCGTGATG CTCATCGAAG CCCACCGCGG CGTGACCGAG
GGCGTCGAGC GCATCCTGGA AAACCTTGGA GAGGTAGCCG AGGGACGGCG CGTGGCGCTG
GCGATCAACA AGATCGACAA GGTGCAATCC GATGTGCTGC TCGGTCTGAC CAAGGATCTC
AACGACCGCT TCCCCTTCGC AGAGACCTTC ATGATCTCGG CCGAAAAAGG CTATGGGACC
GAGGATCTGC GGCAGTGGCT TGCTGCCGAA GTGCCGGAAG GCCCGTGGCT CTATCCCGAA
GACCAGATCG CCGATCTGCC GCTGCGCATG ATCGCTGCCG AAATGACCCG CGAAAAGCTC
ACCCTGCGTC TCCACCAGGA ACTGCCCTAC CAGCTCACGG TGGAGACCGA GAAATGGGAA
GAGCGCAAGG ATGGCTCCGC ACGCATTGAC CAGGTGGTCT ATGTGGTGCG CGATGGCCAC
AAGGGCATCG TGCTCGGCAA ACGTGGCGAG ACCATCAAGG CTGTTGGTCA GGCGGCACGC
GCCGAGCTTG AGGAATTCCT GGATCGCAAG ATCCATCTTT TCCTGCAGGT TAAGGTGCGC
CCCAACTGGC TTGAAGAATC CGAGCGGTAC TCGGAAATGG GCCTTGAGTT CAAAGACGGC
AACTAA
|
|---|
| Protein sequence | MTTRAGFIAL IGEPNAGKST LLNRMVGAKV SIVTHKVQTT RARIRGVAME GDSQLVFVDT
PGLFQPRRRL DRAMVAAAWG GAADADVIVM LIEAHRGVTE GVERILENLG EVAEGRRVAL
AINKIDKVQS DVLLGLTKDL NDRFPFAETF MISAEKGYGT EDLRQWLAAE VPEGPWLYPE
DQIADLPLRM IAAEMTREKL TLRLHQELPY QLTVETEKWE ERKDGSARID QVVYVVRDGH
KGIVLGKRGE TIKAVGQAAR AELEEFLDRK IHLFLQVKVR PNWLEESERY SEMGLEFKDG
N
|
|---|
| |