| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2500 |
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| Symbol | |
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| ID | 4076502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2641580 |
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| End bp | 2642899 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007824 |
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| Product | protein of unknown function DUF224, cysteine-rich region |
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| Protein accession | YP_614494 |
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| Protein GI | 99082340 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.908613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGA GTTTCACCGA CGCGCAATTG CAGGACCCCG GTACGCAGCG GGCCAACGAG
ATCCTGCGCA CCTGTGTGCA CTGTGGTTTT TGTACGGCGA CCTGTCCGAC CTATCAAGTG
CTCGGGGACG AGTTGGACAG CCCGAGAGGC CGGATTTACC TCATCAAGGA TATGCTCGAG
AACGAGCGCG TGCCGGATGA GAAAACCGTA AAGCATATCG ACAGATGCCT GTCGTGCCTT
GCTTGTATGA CCACTTGTCC ATCGGGCGTG CATTACATGC ATCTTGTGGA TCACGCGCGT
GCCTATATCG ACAAGCATTA CAAACGCCCC TTTGGTGATC GGGCACTGCG GTGGATCCTG
GCGCGCATCC TGCCCTATCC CACGCGGTTT CGCCTCGCGC TGTTGGGAGC AAAGATTGCG
CGTCCCTTCC GGGGACTGAT GCCTGACCCA AGGCTGCGGG CGATGCTGGA GATGGCGCCA
AAGGTCATCC CCCCGGTGAG CCGCAATGAC GACCCGCAGA GTTTTGCGCC GGAAGGGCGG
CAAGTGAAAC GCGTGGCGCT TATGACGGGC TGCGCGCAAA AGGCGCTCAA TACGGATATC
AATGACGCCA CCATCCGGCT CCTTCGGCGT TTGGGGTGCG AGGTGGTTGT GGCGGACGGG
GCCGGCTGTT GCGGGGCTCT GACGCATCAC ATGGGGCGTG AGGACGAAAG CCACGCAACC
GCCGCCAAGA ACATCCGCGC GTGGATGGCA GAGAAGAACG GCAAGGGCCT TGATGCGATT
GTCATCAACA CATCGGGCTG TGGTACCACG GTCAAGGACT ACGGCCACAT GTTCCGCAAT
GATGCGCTGG CACAGGATGC GGCAACTGTG TCGAACCTGG CGATGGATAT CTCCGAGTTG
CTGATGCAGC TTGAAATGCC AGAGGCTGAG GATAAGGGGC TGACGGTCGC CTATCACGCC
GCCTGTTCGC TGCAGCATGG CCAACAGATC AAGACGCATC CCAAGACGCT GCTGAAACGC
GCGGGCTTTC GAGTGGTTGA ACCAGCCGAC AGCCATCTGT GCTGCGGCTC TGCAGGGACC
TATAATCTGC TGCAGCCGGA GATTTCCGCA CAACTAAAGG CACGCAAGCT GCGCACGCTT
GAGGCGAAAA ATCCCGACAT CATCTCTGCG GGGAACATCG GGTGCATGAT GCAAATCGGA
TCTGGCACCG AGATCCCGAT CGTGCACACT GTGGAGCTCT TGGACTGGGC AACCGGAGGC
CCTCAGCCAC CCGCTCTCAC GGCGGAGCGC AGCCGACCCT CAGTTCCCAT CTTGCGCTGA
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| Protein sequence | MQTSFTDAQL QDPGTQRANE ILRTCVHCGF CTATCPTYQV LGDELDSPRG RIYLIKDMLE
NERVPDEKTV KHIDRCLSCL ACMTTCPSGV HYMHLVDHAR AYIDKHYKRP FGDRALRWIL
ARILPYPTRF RLALLGAKIA RPFRGLMPDP RLRAMLEMAP KVIPPVSRND DPQSFAPEGR
QVKRVALMTG CAQKALNTDI NDATIRLLRR LGCEVVVADG AGCCGALTHH MGREDESHAT
AAKNIRAWMA EKNGKGLDAI VINTSGCGTT VKDYGHMFRN DALAQDAATV SNLAMDISEL
LMQLEMPEAE DKGLTVAYHA ACSLQHGQQI KTHPKTLLKR AGFRVVEPAD SHLCCGSAGT
YNLLQPEISA QLKARKLRTL EAKNPDIISA GNIGCMMQIG SGTEIPIVHT VELLDWATGG
PQPPALTAER SRPSVPILR
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