Gene TM1040_2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2489 
Symbol 
ID4076854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2629773 
End bp2630507 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID638007813 
Producthypothetical protein 
Protein accessionYP_614483 
Protein GI99082329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.525072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TGATCGCGGC GCTTGGCCTT GCCACCGTGT CATGGATCCC CACGGCCCAT 
TCAGCCGAGA CTTTGGTCGT CGGCGTTGAA AACATCGAGT ACCTCCCACA TTACTATTGG
GACGGAGATA GCTATTCTGG GTTTGGGGCT GATGTGCTCA ATCGTTTTGC CGAGGACGAG
GGCTATACGC TCACCTATCG CGCGCTGCCG ATCTCCAGGC TTATGCAGGC GATGGTCAAC
GGGGACGTCG ATCTGAAGTA TCCCGACAAC GCGTTCTGGT CTGCCGACCT CAAGGAAGGC
AAGAGCATCA CCTATTCTGC ACCAGTGGTT GAAGCGATCG ACGGTGTTAT GGTTCTACCC
GAAAATCTAG GTCAGCCCGT GGAGTCGATC GAACGCTTGG GCACCGTCTT GGGCTTTACT
GCGTTTGCTT GGATGGACCG AATTCAGAGT GGTGCAGTCG CGCTAACTGA AAATTCCAGC
TTCTCTGGCA TGGTGCGCCA GGCGCTTGCT GGACGGATTG ATGGTGCATA TGCCAATCAG
GACGTAGTGC GCCGCGTTCT GACTGATATT GGCATGGAGG CCGAAGCCCT CGTGTTCGAC
GAAGGGTTGC CGCACTCGGT TTCAAACTAC CATCTTTCGT CCGCTACACA TTCAGAGGTG
GTGGAAAAAT TCGATGCCTG GATGGCAGCC AACCCTGATG TGATCGCCGA GTTGAAGTCC
AAGCACGGGT TGTGA
 
Protein sequence
MKKLIAALGL ATVSWIPTAH SAETLVVGVE NIEYLPHYYW DGDSYSGFGA DVLNRFAEDE 
GYTLTYRALP ISRLMQAMVN GDVDLKYPDN AFWSADLKEG KSITYSAPVV EAIDGVMVLP
ENLGQPVESI ERLGTVLGFT AFAWMDRIQS GAVALTENSS FSGMVRQALA GRIDGAYANQ
DVVRRVLTDI GMEAEALVFD EGLPHSVSNY HLSSATHSEV VEKFDAWMAA NPDVIAELKS
KHGL