| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2484 |
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| Symbol | |
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| ID | 4076849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2623072 |
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| End bp | 2623635 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007808 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_614478 |
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| Protein GI | 99082324 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0499056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG AAAGTATCAC GTTGAACTTA CGCGAAATTC GCGCGGCGGC GGGTCTGAGT
TTGTCCCGGG CTGCGGAACT TACCGGGGTC AGCAAGGCGA TGCTTGGGCA GATAGAACGC
GGCGAATCCA GCCCGACGAT CGCGACGCTG TGGAAGATCG CCAAAGGCTT CCACCTCCCT
CTGACGGCGC TGATTGAAGA GAGCACCCGG CCCTCGGGGC GCAGTGGTGA AGTCTATCGC
ACGGTCGAGT TTCCCGGCAG CATCGCAGTC AAAATCGTCT TTCCCTATGA CCCAAGCCTG
GGCGCAGAAA CATTTCACGT CAGCCTCAAA CCCGGGCAAA GCCATGAGTC GCTGCCCCAT
GATACGGGCG TGACGGAAGA GGTCTTTGTG CTTGAGGGGC GTATGGAGGT GCTGCGGGAC
GGTGACTGGG TTGCGCTGGA GACAGGGCAG GGCTTGCGGT TTGATGCCGA TCAGCCGCAT
GGGTATCGCA GCCTGAGCAC GGGAGCCGCC TTTCTGAATA TGCACCACTA CCGGCAGGCG
GCCCTGTCAC GCGCGGCAGA TTGA
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| Protein sequence | MSDESITLNL REIRAAAGLS LSRAAELTGV SKAMLGQIER GESSPTIATL WKIAKGFHLP
LTALIEESTR PSGRSGEVYR TVEFPGSIAV KIVFPYDPSL GAETFHVSLK PGQSHESLPH
DTGVTEEVFV LEGRMEVLRD GDWVALETGQ GLRFDADQPH GYRSLSTGAA FLNMHHYRQA
ALSRAAD
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