| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2449 |
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| Symbol | |
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| ID | 4076931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2590138 |
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| End bp | 2590827 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007773 |
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| Product | helix-turn-helix, type 11 |
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| Protein accession | YP_614443 |
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| Protein GI | 99082289 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.153287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCA GCAATCGGAT GTTCGAGCTG ATCCAGATCC TGCGCGCGGC GCCTGCGTCG
GTACGGGCCG AGGATCTTGC GGCGCAGCTT GAGGTTTCCA AGCGCACGAT TTACCGCGAT
ATCGCCGCAC TTCAGGCCAT GCGTACCCCG GTCGAGGGCG AGGCGGGCAT CGGTTACATG
CTACGCAAGG GTTACGATTT GCCGCCTCTC AATTTCGACG AAGAGGAAAT CGAAGCGCTG
CACGTCGGCC TCGCAATGTT GATGCGCACC GGGGATGGTG CGCTGCAGCA GCCAGCTGCG
CGTGTAGGGC GCAAGATCTG CGACGTACAT GCCAGCGCTG AGTGGCTGCA GGTCGCGCCC
TATGGCGCCC CGCTTGACAA TCCCGAGGAG GGGTGTGTCT CAAAGGCCAT CCTTCGCCAA
GCGGTGCGCA GTTCGCAAAA GTTGCACCTG GCCTATGTGA ATGGCGCTGG AGAACGCAGC
GAACGGGTTC TGCGCCCTCT CGCGCTCATC TATCACACCG ACTGCACGTT GCTTGCGGCG
TGGTGCGAGT TGCGTGGCGG CTTTCGCCAC TTTCGCACAG AGCGCATGAT GTCGGCAGAA
TTGCTCGACT GCTCCTTTGC CGCTGAGGCA GATGTGTTGC GAAAGCTCTG GCAGGAGCAG
GAGAGCAACA CCTATGTCTA CAAAGCGTAG
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| Protein sequence | MTRSNRMFEL IQILRAAPAS VRAEDLAAQL EVSKRTIYRD IAALQAMRTP VEGEAGIGYM
LRKGYDLPPL NFDEEEIEAL HVGLAMLMRT GDGALQQPAA RVGRKICDVH ASAEWLQVAP
YGAPLDNPEE GCVSKAILRQ AVRSSQKLHL AYVNGAGERS ERVLRPLALI YHTDCTLLAA
WCELRGGFRH FRTERMMSAE LLDCSFAAEA DVLRKLWQEQ ESNTYVYKA
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