| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2432 |
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| Symbol | |
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| ID | 4076914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2571061 |
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| End bp | 2573409 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007754 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_614426 |
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| Protein GI | 99082272 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TCGTTGATGA TCCCACTTCC CCCGAGATGC CCGCAAATGG CGAATTGCGC
GAACCTTTGC GCCGCGCCAT TGGCGAACGA TATCTGACCT ATGCGCTTAG CACGATCATG
CACCGGGCCT TGCCCGATGC GCGTGACGGC CTGAAGCCTG TGCACCGGCG CATCCTTTAC
GCCATGAGCC GATTGCGCCT GTCGTCATCG GGCGGTTTTT TGAAATCGGC CAAGATTTCT
GGCGACACGA TGGGGGATTT CCACCCCCAT GGGGACGCGG CGATTTACGA CGCCATGGCG
CGTCTGGCGC AGGATTTTGC GGTGCGCTAT CCGCTGGTTG ATGGTCAAGG TAACTTTGGC
AACATCGACG GCGACAACCC TGCGGCCTCG CGCTACACCG AGGCGCGGAT GACCTTCATC
GCCGAAGCGA TGCTCGAAGG GCTGGGCGAG GACGCGGTAG ATTTTCGCGA TAATTACGAT
GGCCGCCTGC AAGAACCGAG TGTCCTGCCT GCGACTTTCC CGAATATTCT CGCCAATGGC
GCCAGCGGTA TCGCAGTGGG GATGGCCACC AATATTCCCC CGCATAACAT ATCCGAACTG
ATCGACGCCT GTGTCCACCT GATCAAAGCG CCCAATGCTG CTGATGACAC GCTGCTTCAG
TATGTGCCCG GACCGGATTT TCCCACCGGC GGCACCATTG TAGAGCCGAA AGAGAACATC
GCGCAGGCCT ATCGCACAGG GCGTGGCTCG TTCCGGTTGC GAGCCAAGCA CGAGATCGAG
GATCTGGGTC GGGGCCAGTG GCAGGTTGTT GTCACCGAAA TCCCTTATCA GGTGCAGAAA
TCCAAGCTCA TCGAGAAAAT CGCAGAGCTG ATCCAAACCA AGAAAGTGCC GATTCTCGCG
GATGTGCGCG ATGAAAGCGC CGAAGACATC CGCATTATCC TCGAACCCAA GTCCAAGAAC
GTCGACCCGG AGGTTCTGAT GGGTCTGATG CATCGCAACT CCGATCTGGA GGTGCGATTC
TCACTCAACA TGAACGTGCT GATCGACGGC GTGACGCCCA AGGTCTGCTC GATGAAGGAG
GTGCTGCGCG CCTTTCTGGA TCATCGCCGC GATGTGCTTC AGCGCCGTTC GCGCCACCGG
ATGGCAAAGA TCGACCACCG GCTTGAAGTG CTCGATGGTT TCATCATCGC GTTTTTGAAC
CTCGACCGGG TGATCGACAT CATCCGCTAT GACGAGGACC CCAAAGCCGC GCTGATGCGC
GAAAACTGGG ATCGCGAACA CCCCCGCGCC TTTACCGAGG CCGAGTATGT CACGCCTGCC
GCAGGTGACG GCGAACTCTC CGAGGTGCAA GCTGAGGCGA TCCTGAACAT GCGTCTGCGC
AGCCTGCGCA AGCTCGAAGA GATCGAACTC ACCCGCGAGC GTGACGCCCT GCGCGAAGAA
CGTGCGGGCC TCGTGGAACT TCTGGGCAGC GAAGAGCTGC AGTGGAAGAA GATCACCGAG
CAGCTGCGCG AGACCAAGAA GCAGTTCGGC AAAAACTATG AAGGCGGCGC ACGGCGGACG
CAATTTGCCG AAGCGGGTGA AATCGAGGAC GTGCCGCTCG AGGCCATGAT CGACCGAGAA
CCGATCACCG TGGTCTGCTC GCAGATGGGC TGGATTCGCG CGATGACTGG CCATATCGAC
CTCAGTCGTG AGCTGAAGTT CAAAGACGGC GACGGGCCGC GTTTTATCTT CCACGCGGAG
ACCACGGACC GGCTGTTGGT CTTTGGTTCA AATGGGCGGT TTTATACGCT CTCGGCCGCG
AACCTTCCCG GCGGGCGCGG CATGGGGGAA CCTGTGCGCC TGATGGTCGA TCTGCCCAAC
GAGGTCGAGA TTGTCGATCT CTTCATTCAC AACCCCGAGG GTCGGCTTCT GGTGGCATCG
GATGCGGGCA ACGGGTTTGT CTGCGCCGAG AAAGACATCG TCGCCCAGAC CCGAGGCGGC
AAGCAGGTGC TGAACGTCAA GGATGACGAG CGGGCCAAGA TCTGTATCCC CGTCGCCGGG
GATCACGTCG CGGTGGTCTC GGAGAATGGC AAGTTTCTCG TCTTTGCGAT CGAAGAGATG
CCCGAACTCA CACGCGGCAA GGGTGTGCGC CTGCAGAAAT ACAACATGGC GCGCGGGCGC
CAGGGCGCGC TCGAACTTGA TGGTGGGCTG GCGGATGTCA CCACCTTCAA CTGGGACGAA
GGGCTGCACT GGGAGATGGG TGGTGGCAAA ATTCGTCACG AGACCGACCT CACCCAGTGG
CTGGGCAAGC GCGCGGGCAT CGGCAAGCGC CCCCCCTACG GCTTCCCCAA GGACTACAAA
TTCAAATAG
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| Protein sequence | MTDIVDDPTS PEMPANGELR EPLRRAIGER YLTYALSTIM HRALPDARDG LKPVHRRILY
AMSRLRLSSS GGFLKSAKIS GDTMGDFHPH GDAAIYDAMA RLAQDFAVRY PLVDGQGNFG
NIDGDNPAAS RYTEARMTFI AEAMLEGLGE DAVDFRDNYD GRLQEPSVLP ATFPNILANG
ASGIAVGMAT NIPPHNISEL IDACVHLIKA PNAADDTLLQ YVPGPDFPTG GTIVEPKENI
AQAYRTGRGS FRLRAKHEIE DLGRGQWQVV VTEIPYQVQK SKLIEKIAEL IQTKKVPILA
DVRDESAEDI RIILEPKSKN VDPEVLMGLM HRNSDLEVRF SLNMNVLIDG VTPKVCSMKE
VLRAFLDHRR DVLQRRSRHR MAKIDHRLEV LDGFIIAFLN LDRVIDIIRY DEDPKAALMR
ENWDREHPRA FTEAEYVTPA AGDGELSEVQ AEAILNMRLR SLRKLEEIEL TRERDALREE
RAGLVELLGS EELQWKKITE QLRETKKQFG KNYEGGARRT QFAEAGEIED VPLEAMIDRE
PITVVCSQMG WIRAMTGHID LSRELKFKDG DGPRFIFHAE TTDRLLVFGS NGRFYTLSAA
NLPGGRGMGE PVRLMVDLPN EVEIVDLFIH NPEGRLLVAS DAGNGFVCAE KDIVAQTRGG
KQVLNVKDDE RAKICIPVAG DHVAVVSENG KFLVFAIEEM PELTRGKGVR LQKYNMARGR
QGALELDGGL ADVTTFNWDE GLHWEMGGGK IRHETDLTQW LGKRAGIGKR PPYGFPKDYK
FK
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