| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2431 |
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| Symbol | |
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| ID | 4076913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2570072 |
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| End bp | 2570755 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007753 |
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| Product | SH3, type 3 |
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| Protein accession | YP_614425 |
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| Protein GI | 99082271 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGGT TTGTGTTGGT TTCTTTTGCT GGTCTGGCGC TCGCTTTCTA TGAATTGAGT
GGTGGTGCGG ATTTTGCGCC ACCAGAACGC CCCGCGACTG ATGTGGCGCA GGAACAGACA
AGTACGGCGC GTGAGCGTGG TCGAATCGTC AGCCGTCCTG CAGAAACCCA ACTCGCGAAC
CCGGTTCTGA CGCCTTATTC TGCAGCAAGT GGCTCTGTCG TCGCTGATGG TGGAGCAGAT
CTGATCACGG CCGCGACCGG CAGCCGTGTT GAGCCAGCCG TCGAGCGCAC CGGCACCGAA
GGCGCTGCCG CAGTGAGCAT CTCCTTGCGC GATCCCGCGT CGGTGGCGTC CTTGCCCCAG
CCCATTTCCC TGAACCTGCC GGTGACGGGG CTTCGCATCG CCTCCGTCGA AGCGGGGTTG
GGCGCGATCA CGGCTGAGGC ACCAGAACCC ACCCGCCAAG CAATCGAGCC GGAACCGATC
GGTGAGTTCC GCAAGGTGCG CGCGTCGCGC GCCAACGTTC GCCTTGGTCC CGGCACCAAC
TATCCGGTTT TGATGCAACT TCTGGCCGGG GACAATGTGC GGGTTCTCAA TGACGACGAG
TCCGGCTGGT CCCTGCTGGA AAACCCGAAG ACCGGCCAGG TGGGCTGGAT TGCGGCTTCC
CTGCTGAGCG CGAAACAGTC ATAA
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| Protein sequence | MSRFVLVSFA GLALAFYELS GGADFAPPER PATDVAQEQT STARERGRIV SRPAETQLAN
PVLTPYSAAS GSVVADGGAD LITAATGSRV EPAVERTGTE GAAAVSISLR DPASVASLPQ
PISLNLPVTG LRIASVEAGL GAITAEAPEP TRQAIEPEPI GEFRKVRASR ANVRLGPGTN
YPVLMQLLAG DNVRVLNDDE SGWSLLENPK TGQVGWIAAS LLSAKQS
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