| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2408 |
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| Symbol | |
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| ID | 4076734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2546676 |
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| End bp | 2548091 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007730 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_614402 |
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| Protein GI | 99082248 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTCCT GCCAGCGCGG ACTTAGCCTT GGGACGACCC TCAATGGCTC GACCTGGATC
CCAATGACAC TCAGTACCAC CAATCAGAGC CTGATGGCGC GCGTTGTGCG TTCGACGTCA
TGGATCGTTC TGGGGTTTGG GACTGGCCAG ATCCTGCGAC TCGGGTCGAA TTTGTTGCTG
ACGCGCATCC TCTTTCCCGA AGCCTTTGGG CTCATGGCTC TGGTCACTGT GATCATCATT
GGCCTCTCGC TGTTTTCGGA TATGGGCATT TCCAATGCCA TCGCGCAAAA CCCCCGAGGC
GATGAGCCGG ATTTTCTCGA CTCCGCCTGG ACCGTTCAAA TTATCCGGGG CGGGCTCCTG
TGGCTGCTGA CCTGCGCCCT CGCCCTGCCT GCCGCTTCTT TTTATGACGC CCCCGAACTG
GCCTATTGCC TGCCGATCGC GGGGTTTAGT CTGGTCCTAC AGGGGCTTTT ACCGACACGG
GTCGAGACGG CGTATCGCCA TCTCCTTGTA GGGCGGGTGA CGGCGATCAA CCTCATGGCA
CAGGCCTGTG GCATCCTCTG CATGGTGACA CTTGCCATCT GGACCCAATC GGTGATCGCA
CTCGCGATTG GCACTGTCGT TCAGGAAGGT GCCAAACTGG CATTTGTGCA CTGGACGCTA
CCCGGGCGGC GCAACAGCCT GCGGTGGGAG CCCGCAGCCA CGCATGAGCT GATCGGCATG
GGCAAGTGGA TCTTCCTTTC CACGGCCTGC TTCTTTCTCA CGACCCAGGG CGACCGGGCG
ATCCTGGGCA AATACCTCTC GCTTGAGGCG ATGGGCATCT ACAATATCGC GTTCTTTCTG
GCGAATTTTC CAGTCCAACT GGGCCAGGAC GTCAATCAAC GCCTCATGAT CCCGGTCTAT
CGCGACAAGC CAGCGCTTGA GAGTGACGAA AACCGGCGCA AACAGCGCCA GCTTCGCTAC
GCGCTCACGG GGGGGATCCT GTCGATCCTG TGGCTGATGG CATGGATTGG TCCGTGGCTT
GTGGAGCTCT TGTATGATGA TCGCTATGCG GCGGCCGGGC CGGTGATCGT TCTGCTTGCG
AGCAGTCTGG CCCCGTCGAT CATCGTCCTG ACCTACGATC GTGCCGCGCT GGCTGCTGGC
GACACCAAGC GATTCTTCTT TTACACGGCC ACCCGCGCCT TTGTTCAGAC TGCACTGTTT
CTGGCCGGGG TCACCCAGTT TGGACTGGTG GGAGGCATTG CGGCGATGGG GCTGGCTGTT
TTCTGCTCCT ACCCGACATT GATGCGACAC ACGCGCCCTT ACCGGGCTCA GGACCCCGGG
CACGATCTGG TCTATCTGAC CGCCAGCCTC GTGATGTGTG GGAGCGCACT CTGGTACCAC
TGGCCCAAAA TCGCAGCCAG TGTCGGGGTC ATGTAA
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| Protein sequence | MTSCQRGLSL GTTLNGSTWI PMTLSTTNQS LMARVVRSTS WIVLGFGTGQ ILRLGSNLLL
TRILFPEAFG LMALVTVIII GLSLFSDMGI SNAIAQNPRG DEPDFLDSAW TVQIIRGGLL
WLLTCALALP AASFYDAPEL AYCLPIAGFS LVLQGLLPTR VETAYRHLLV GRVTAINLMA
QACGILCMVT LAIWTQSVIA LAIGTVVQEG AKLAFVHWTL PGRRNSLRWE PAATHELIGM
GKWIFLSTAC FFLTTQGDRA ILGKYLSLEA MGIYNIAFFL ANFPVQLGQD VNQRLMIPVY
RDKPALESDE NRRKQRQLRY ALTGGILSIL WLMAWIGPWL VELLYDDRYA AAGPVIVLLA
SSLAPSIIVL TYDRAALAAG DTKRFFFYTA TRAFVQTALF LAGVTQFGLV GGIAAMGLAV
FCSYPTLMRH TRPYRAQDPG HDLVYLTASL VMCGSALWYH WPKIAASVGV M
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