Gene TM1040_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2407 
Symbol 
ID4076733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2545320 
End bp2546534 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content62% 
IMG OID638007729 
Productglycosyl transferase, group 1 
Protein accessionYP_614401 
Protein GI99082247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTG CCTATGTGCT CAATACTTAC CCACAACCTT CGCAGAGCTT CATTCGCCGT 
GAAATCCAAG CGCTCGAGCG GCGGGGGATC ACGGTGGTCC GGCTTGCGAT GCGGGCGACG
GATCAGGCGC TTGTGGATCC CGGTGATCAG GCGGAGGCGG CGCAGTGCCA CTATGTGCTG
GCTGCGGGTG CGGCGCGTCT TGTGTTAGCA CTTCTGGCTT GCGGTCTGCG CGCGCCGCTT
TCCGGCTGGC GCGCTTTCCT GTTGGCGATG CGGCTTGGAA GGGCCCAGTC CAAGCGACTG
CGGCATTTGA TCTATCTGTT GGAGGCGGCT TATGTGACCC GCGTCACTGC GCGTGTGGGG
TGCGCGCATC TTCACGCGCA CTTCGGCACC AATGCCACAA CGGTTGCACT TTTGGCAAAT
GCGCTAGGCG CACCGGGGTA CAGTTTTACC ACCCATGGAC CCGAAGAATT CGACGCGCCG
CATGCGCTTT CGTTGGGCGA GAAAGTGGAC CGCGCCCGTT TCGCCGTGGC GATTTCAAGC
TTCGGGCGCA GTCAACTTAG CCGCTGGGCG GCGTATGGCG CTTGGCCGCG TATCAAGATT
GTGCATTGCG GTATCGAACC CGCGCGGTTC AGCGCCCCGG CCCCTGTACC AGAGGGCCCG
TTGCGACTGG TGGCCATCGG GCGCTTTGTG GAGCAGAAGG GACTGATGGT TCTGATCCAG
GCTCTTGCCC TAGCGGTGCG CGCGGTCCCT GACATTCATG TGTCTTTGGT TGGTGACGGC
GAGATGCGCG CCGATCTGGA AACCGCGATC AAAGCGCATG GGCTTTACGA GAATGTCACC
CTCACCGGAT GGCTCTCGGA GGCGGGCGTG CGCACGGCGC TCGTGGAGTC GCACGCTTTG
GTGCTGCCGT CTTTTGCCGA GGGGTTGCCG ATGGTGGTGA TGGAAGCCAT GGCTTCCGGA
CGACCAGTGC TGGCCACCTA TGTCGCCGGC ACGCCCGAAC TGGTTGTGCC AGATGAAACT
GGCTGGATGG TGCCCGCGGG TGATGCACAG GCCTTGGCGG ATCTCATGGT AGAGGTCGCC
GCATTGCCAA GAACGCAGTT TGAGCAAATG GGCCAGAAGG CGCGTTCGCG CGTGCTCGAG
CGCCACGATA TCGACCGTGA AGCCGAGAAG TTGGCGCAAC ATTTTGCAGA TGCGATCGCG
GAAAACGCTG AGTGA
 
Protein sequence
MKIAYVLNTY PQPSQSFIRR EIQALERRGI TVVRLAMRAT DQALVDPGDQ AEAAQCHYVL 
AAGAARLVLA LLACGLRAPL SGWRAFLLAM RLGRAQSKRL RHLIYLLEAA YVTRVTARVG
CAHLHAHFGT NATTVALLAN ALGAPGYSFT THGPEEFDAP HALSLGEKVD RARFAVAISS
FGRSQLSRWA AYGAWPRIKI VHCGIEPARF SAPAPVPEGP LRLVAIGRFV EQKGLMVLIQ
ALALAVRAVP DIHVSLVGDG EMRADLETAI KAHGLYENVT LTGWLSEAGV RTALVESHAL
VLPSFAEGLP MVVMEAMASG RPVLATYVAG TPELVVPDET GWMVPAGDAQ ALADLMVEVA
ALPRTQFEQM GQKARSRVLE RHDIDREAEK LAQHFADAIA ENAE