| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2395 |
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| Symbol | |
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| ID | 4076721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2518778 |
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| End bp | 2520610 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007717 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_614389 |
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| Protein GI | 99082235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAT TTTGCCAATT GCGCCGGACT GCCTTTCCCC TGTGCCGCAC TCTGCGCCCC
TTGTCGCTGG CCTTGAGCCT GAGTGTCGCC CTATCGGCCA GCCCCCTGTC GGCGCTGGAT
GCAAACCTCG CCGCTCCCAA GGCACCGGAC GATCTCGCCG AACGGCTGCG CGGCGCAAGC
GCGGCGCTTG GGCTGAGCCA AAACTCGGAA ACACAAGAGA TCATTGCGGC ATCGCTCTCG
GACTATCGGA CCTTGGTTCA AGTCCTTTAT GACGCGGGAT ATTTTGCGCC TGTCGTCAAT
ATTCGTCTGG ATGGGCGCGA GGCTGCGGCG ATCAACCTGC TGAACCCGCC AAAGCGCGTG
CAGAACATTG CCATCACCGT CGATCCGGGC CCGGCCTTCA CCTTTGGCCG TACCGTCGTC
ACCCCCCTGC CCGCGGGGGG GACCGCGTCC CTGCCCGAAG GCTTTGCGAC CGGCAAACCC
GCCAACACCG GTGCCATTCA GGAGGCTGCA AACGCGGGCC TTGGCGCCTG GGATCGTGCC
GGCCACCCGA AGGTAGAACT TGCCGGTCAA TCCATTACGG CCAATGCGGT CAAACGGCGC
CTCGATGCCG AACTCAGGAT CGCGCCGGGA CCACGGCTGC GCTTAGGCAA CCTCAGAATT
ACAGGCGAAT CCGACGTTCG ACCTCAGGCG ATCCAGCGGA TCGCAGGCTT TGCCAAAGGG
CAAACCTATC ATCCCGATCT CGTCTCAAAA GCCGCCAATC GCCTGCGCCG CACGGGGGCG
TTCTCGACCG TTGCGCTGCG ACAGGCCGAC GTGCCGAACC CCGATGGCAG CCTCGATTTC
ATTGCCGAAG TCGAAGATCT GCCCAAGCGG CGTTTCACGT TCGGGGTGGA GATTTCCTCG
TCGCAGGCGA TGGAACTCAG CACCAGCTGG ATGCACCGGA ACCTGTTTGG CGGCGCCGAG
CGATTGAAAA TCGACTTTTC GGTGAGTGGC ATCGGCAGCA GCGACATCAA CAGCAGCATC
ACCGCGCGTC TGGACCGCCC GGCTGCCCTG GGCACGGACC GGAACCTGTT CTACCTCGCC
TCGATCGAGC AGTTGCGTGA AGAGCATTAC ACCGCCCGCA GCGCCTTGGC AGCGGTCGGG
GTGCGGCGCA TCGTTTCCGA CACCACCTTT GTCGAAGGCG CGCTCGGATT GCGCTACATC
AACGCGGACG ACGCCTATGG CAGCAACCGC GAGTTCAAAT ATGTGGCCGC ACGTCTGCGG
GGCGAAAAGG ACATGCGCAA TATCAAGACC AACCCGACGG CTGGCTACTA TCTCGACGGG
GAAATCGTCC CCTTTGTGGG CGTATCGGGT GGCGATCCCG GGGTGCAGAT CAACATTGAT
GCCCGCGGTT ACAAAGCGCT AGGCAACTCT GATCGTCTGG TCCTTGCAGG GCGTGTGCAG
CTTGGCTCGA TCATCGGTCC AGACCCAAGC GATGTCTCTC CGACATTTCT GTATTTCTCG
GGCGGTGCGG GCTCCGTGCG CGGACAGGAG TTCCAATCCC TCGGGGTTGA CACCCCCGGC
GGCACAGCCG GTGGGCGCGC CTACCTTGCG CTTTCGGGCG AGCTGCGCGG GCGGATCACA
AATGCGATTT CGCTGGTGGG CTTTTACGAC GTCGGCTTTG TCGACAAAGA CAGTTTTATC
AGTGGCGACA GCGAATATCA TGCGGGGGCC GGTATTGGTG TACGCTATGA CGTCACCGGT
GTTGGCCCGA TCCGGCTCGA CCTCGCGATG CCGGTGGCGG GCGACACCGA AGACGGGTTG
CAGTTTTACA TCGGCATAGG ACAGGCGTTT TGA
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| Protein sequence | MFRFCQLRRT AFPLCRTLRP LSLALSLSVA LSASPLSALD ANLAAPKAPD DLAERLRGAS
AALGLSQNSE TQEIIAASLS DYRTLVQVLY DAGYFAPVVN IRLDGREAAA INLLNPPKRV
QNIAITVDPG PAFTFGRTVV TPLPAGGTAS LPEGFATGKP ANTGAIQEAA NAGLGAWDRA
GHPKVELAGQ SITANAVKRR LDAELRIAPG PRLRLGNLRI TGESDVRPQA IQRIAGFAKG
QTYHPDLVSK AANRLRRTGA FSTVALRQAD VPNPDGSLDF IAEVEDLPKR RFTFGVEISS
SQAMELSTSW MHRNLFGGAE RLKIDFSVSG IGSSDINSSI TARLDRPAAL GTDRNLFYLA
SIEQLREEHY TARSALAAVG VRRIVSDTTF VEGALGLRYI NADDAYGSNR EFKYVAARLR
GEKDMRNIKT NPTAGYYLDG EIVPFVGVSG GDPGVQINID ARGYKALGNS DRLVLAGRVQ
LGSIIGPDPS DVSPTFLYFS GGAGSVRGQE FQSLGVDTPG GTAGGRAYLA LSGELRGRIT
NAISLVGFYD VGFVDKDSFI SGDSEYHAGA GIGVRYDVTG VGPIRLDLAM PVAGDTEDGL
QFYIGIGQAF
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