| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2388 |
|---|
| Symbol | |
|---|
| ID | 4076714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2507721 |
|---|
| End bp | 2508134 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614382 |
|---|
| Protein GI | 99082228 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2346] Truncated hemoglobins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACG TGCAACCATT GGCGCGGTTC CAGATCTCCG CCGATGACAT CAGGCGGGTG
GTTTCGGTCT TTTACGGCGA AGTCCGCCGC CATCCGGTAC TTGCGCCCGT TTTTAACGCG
CATGTTGAGG ATTGGCCTCA ACATGAGGAG AAGATTGCCA ATTTCTGGCG CAACGCGATC
CTGCGCGAGC GGGTCTATGA CGGGTTTCCG ATGCGCGAAC ACCTGTCCCG ACCTGATGTG
CGGGCAGAGC ATTTCCCGGT CTGGCTTGGT CTGTTCCACG CGGTTCTTGA GCGCGAGGTT
ACGGCTGAAC AGGCGCTGCA ATGGGGCCAT CTCGCCGATC GCATCGGCGA AGGGTTCCGC
ACCGGGATCG AATCCATTCG CCAGCCCAAA GATGAGCCGC CGAAACTGAT TTGA
|
|---|
| Protein sequence | MQDVQPLARF QISADDIRRV VSVFYGEVRR HPVLAPVFNA HVEDWPQHEE KIANFWRNAI
LRERVYDGFP MREHLSRPDV RAEHFPVWLG LFHAVLEREV TAEQALQWGH LADRIGEGFR
TGIESIRQPK DEPPKLI
|
|---|
| |