| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2354 |
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| Symbol | |
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| ID | 4076473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2475241 |
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| End bp | 2475738 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007676 |
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| Product | hypothetical protein |
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| Protein accession | YP_614348 |
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| Protein GI | 99082194 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.306931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCC CGCCCGAGGC CGCCCTGTGG TTCCTGCCCT TCGTTGTGCC GCTGTGCTAT
GTGGTGGCGC TGAACGATCT GCGCAGCATG CGCATTCCGA ACTGGACGGT CGACACGCTT
GGACTGATCT ACATCCTGCT TGGCCTCCTG GTGATGCCGA CATGGGCGGA CTACGGCTGG
CAGCTGCTGC ATCTGCCTGT CGGCATCGCC ATCGGATACC TGTTCTACGC CAGCGGTCTG
GTCGGGGCGG GAGATGCAAA ATTTGCAGGT GCCGCAGCGC CTTATGTGGC TTTTGCGGAC
CTGAAGCTGA TCATGATCAT CTTTGCGATT ACGCTATTGT CGGGTTTTCT GGCCCATCGC
CTTGCGCGCC ACACCCCCCT GCGCCGCCTC GCACCCCATT GGCAGAGCTG GAATACGGGC
GCGAAGTTTC CAATGGGATT GTGCCTTGGC GCGACCCTTG CGATCTACCT CGGTCTAGCG
GCCTTTGTTC CAGTCTAG
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| Protein sequence | MHFPPEAALW FLPFVVPLCY VVALNDLRSM RIPNWTVDTL GLIYILLGLL VMPTWADYGW
QLLHLPVGIA IGYLFYASGL VGAGDAKFAG AAAPYVAFAD LKLIMIIFAI TLLSGFLAHR
LARHTPLRRL APHWQSWNTG AKFPMGLCLG ATLAIYLGLA AFVPV
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