| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2329 |
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| Symbol | |
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| ID | 4078319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2449051 |
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| End bp | 2450313 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007651 |
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| Product | peptidase |
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| Protein accession | YP_614323 |
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| Protein GI | 99082169 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.124129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.969107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGTTA AACAAGACAC CCTGCCCAAC GGGTTTCGTA TTGTCACCGA GTATATGCCG
GGGCTGCAAT CCGCAGCCCT CGGCATCTGG GTTTCGGCAG GGGGCCGCCA TGAGCGGCTC
GAACAGAATG GGGTGGCCCA TTTCCTTGAA CATATGGCGT TCAAAGGCAC CAAGCGGCGC
AGCGCGTTGC AGATCGCCGA AGCCATCGAG GATGTGGGCG GCTACATCAA CGCCTATACC
AGCCGCGAAG TGACCGCCTA TTACGCGCGT ATTCTCAAGG ACGACGTGGA TCTCGCCCTT
GATGTGATCG GCGACATCGT TCTGAACTCG GTCTTTGATG AACGCGAGAT CGAAGTGGAA
CGCGGGGTCA TCCTGCAGGA AATCGGTCAG GCGCTTGATA CGCCGGACGA CATCATTTTT
GACTGGCTGC AGGAAGAGAG CTATCGCGAA CAGGCGATTG GCCGCTCGAT CCTCGGCCCC
GCAGAACGGG TTCGCAGCTT CAACAAGGAA GATCTGACCC GGTTTGTGGC CGAACACTAT
GGTCCCGGTC AGATGATCCT CTCAGCCGCT GGTGCGGTCG ACCACGATCG GTTGGTGAAG
GCCGCTACAG AAATGTTTGG TCATCTGGAA CCCAAACAGC AGGACGTGAT CGAATGTGCT
CGCTTTACCG GCGGTGAAGC GCGCCACGAC AAAGCGCTGG AGCAGGCCCA TGTGGCGCTG
GCCTTTGAAA GCCCAAGCTA CCGCGCCGAT GACATCTATG CCGCGCAGAT CTATGCGGCG
GCGCTCGGCG GCGGCATGTC CTCTCGGTTG TTTCAGGAAG TGCGCGAAAA GCGCGGGCTT
TGCTACACGA TCTTTGCGCA GGCAGGGGCC TATGAGGACA CCGGCATGAT GACCATCTAC
GCGGGCACCT CCGGGGCGCA GGTTTCGGAT CTTCTGGGCA TCACGGTTGA TGAGCTCAAG
CGCTCCGCAG ATGACATGTC CGACGCCGAG GTGGAGCGTG CCCGCGCGCA GATGAAGGCC
GGTATGCTGA TGGGGCTTGA GAGCCCTTCG AACCGGGCGG AACGTCTGGC GCGCCTCGTC
CAGATCTGGG ACCGGGTGCC AAGCCTTGAG GACACGGTTG CAAAGATTGA TGCGGTAACC
ACCGCGGATG TGCGCGCCAT GGCGGCGCGG ATTTCTCGCG AGGCACCGGC TGCGCTAGCA
CTCTATGGCC CGGTCGCCGA AGCGCCGCGC CTTGAGGAGA TCGCCCGGAG GCGCGCTGCC
TGA
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| Protein sequence | MTVKQDTLPN GFRIVTEYMP GLQSAALGIW VSAGGRHERL EQNGVAHFLE HMAFKGTKRR
SALQIAEAIE DVGGYINAYT SREVTAYYAR ILKDDVDLAL DVIGDIVLNS VFDEREIEVE
RGVILQEIGQ ALDTPDDIIF DWLQEESYRE QAIGRSILGP AERVRSFNKE DLTRFVAEHY
GPGQMILSAA GAVDHDRLVK AATEMFGHLE PKQQDVIECA RFTGGEARHD KALEQAHVAL
AFESPSYRAD DIYAAQIYAA ALGGGMSSRL FQEVREKRGL CYTIFAQAGA YEDTGMMTIY
AGTSGAQVSD LLGITVDELK RSADDMSDAE VERARAQMKA GMLMGLESPS NRAERLARLV
QIWDRVPSLE DTVAKIDAVT TADVRAMAAR ISREAPAALA LYGPVAEAPR LEEIARRRAA
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