| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2310 |
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| Symbol | glyS |
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| ID | 4078300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2430406 |
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| End bp | 2432469 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007632 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_614304 |
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| Protein GI | 99082150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.75706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC TTCTGATCGA ACTTTTCTCC GAGGAAATCC CCGCCCGCAT GCAGGCGCGC
GCGGGCGAAG ATTTGAAGAA GCGGATGACC GACGGTCTGG TCGAGGCGGG GCTGACCTAT
GCCGGGGCTC ATGCGCTGAC GACGCCGCGC CGCCTGACGC TGGCCATCGA GGGTCTCCTG
GATCATTCCC CCACCGTGCG CGAAGAGCGC AAAGGCCCCA AGGTCGGCGC GCCCGAGAAG
GCCATCGAGG GCTTTTTGCG CGGTGCGGGG CTGACACGCG ACCAGCTTGA GGAACGCGAC
ACCCCCAAAG GTGCGGTCTA CTTTGCCACC ATCGAAAAGC CGGGCCGCCC GGCGGCCGAG
ATCATTGCAG AGGTGCTCGA AGACACCATT CGCAATTTCC CTTGGCCCAA GTCGATGCGC
TGGGGGGCAG GCGCTTTGCG GTGGGTGCGG CCGTTGCACT CCATCCTGTG CCTTCTGACC
CGCGAAGAGG GCAGCGAGGT GGTCCCGCTG GAGATCGACG GTGTCACATC GGGCGACAGC
ACCGCGGGTC ATCGGTTCAT GGCGCCCGCG CGCTTTGCCG TGACGGGATT TGAGGACTAC
GCCGCCAAGC TCAAACGCGC CTTCGTGGTG CTCGACCCCA AGGAGCGCGA GGCGGCGATC
TGGCAGGATG CCACAAATCA GGCCTTTGCC TCGGGTCTTG AGGTTGTCGA TGACAAGGGT
CTTCTGGCCG AGGTTGCAGG GCTGGTGGAA TGGCCGGTGG TTCTGATGGG CTCGATTGAT
GCGGAGTTCC TCGACCTGCC GCCGGAGGTG CTGCAGACCT CTATGAAAGA GCACCAGAAG
TTCTTCTCGG TAAAGAATCC CAAGACCGGG CGGATTGAGA AATTCATCAC CGTGGCCAAC
CGCGAAACCG CAGACAATGG CGCGACCATT CTGGCGGGCA ACCAAAAGGT GCTGAGCGCG
CGTCTGGCAG ATGCGAAGTT CTTCTGGGAG AACGACCTGC GCATCGCAAA ATCCGAGGTC
GGCGTGGAAG GCTGGCTCGA GAGCCTTGGC AATGTGACCT TCCACAACAA GCTTGGCACT
CAGGCCGCGC GCATCGACCG GATTGCGGCG CTGGCACGCG AGATTGCCCC CGTTGTGGGT
GCGGATGCGG ATCTGGCGGA ACAGGCGGCG AAGGTCGCCA AGGCCGACCT CAGCTCCGAG
ATGGTTTATG AGTTTCCTGA ACTGCAGGGC CTGATGGGCC GCTATTACGC TCAGGCTGCC
GGGCTGCCGC AAGAGGTCGC CAATGCCTGT GAGCTGCATT ATTCGCCCCT GGGCCCCAGC
GATGATGTGC CGACAGAGCC CGTTTCGGTC GCCGTGGCGC TTGCGGATAA GATCGACACG
CTCACCGGGT TCTGGGCGAT TGATGAAAAG CCCACCGGGT CCAAAGACCC CTACGCGCTG
CGCCGTGCGG CACTCGGGGT TATTCGGTTG GTGCTCTCGA ACGATGTGCG AGTGGGTTTG
AAAGAAGTCT TTGCAAAAGC CTATGAGGGC GCGGATGGGT CGGATCTTCT GTCGTTCTTC
CACGACCGCC TCAAGGTCTT TCTGCGCGAT CAGGGGATTC GCCATGATGT GATCGACGCC
TGCATCGCGA TGGAGGGCAG TGACGATCTG ACACTTTTGG TGAAACGCGC CCGCGCGCTT
GAGGATTTTA TGAAATCCGA GGATGGCGAG AACCTGCTGC AAGGGTTCAA ACGCGCCAAC
AACATATTGT CGCAGGCCGA GGAAAAAGAC GGCGTCGAAT ATTCCTTTGG CGCGGACAAG
AAATTCGTCG AGGATCCTGC CGAGGCGGCG CTCTTTGAAG CGCTGGCTGC AAACGAGGCA
GCGATCTCCA CGGCCATCGA GGCCGAGGAT TTCGCGGCCG CCATGGGCGG CATGGCCGCA
TTGCGTGCGC CGGTGGATGC CTTCTTTGAG GCGGTGCAGG TCAATTCCGA CAATCCGGTA
GTGCGCCGCA ACCGGCTCAA TCTCCTCAGC CAGATCCGCA AGGTCTGCGG TCAGGTGGCG
GACCTGAGCC GCATCGAGGG CTGA
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| Protein sequence | MADLLIELFS EEIPARMQAR AGEDLKKRMT DGLVEAGLTY AGAHALTTPR RLTLAIEGLL
DHSPTVREER KGPKVGAPEK AIEGFLRGAG LTRDQLEERD TPKGAVYFAT IEKPGRPAAE
IIAEVLEDTI RNFPWPKSMR WGAGALRWVR PLHSILCLLT REEGSEVVPL EIDGVTSGDS
TAGHRFMAPA RFAVTGFEDY AAKLKRAFVV LDPKEREAAI WQDATNQAFA SGLEVVDDKG
LLAEVAGLVE WPVVLMGSID AEFLDLPPEV LQTSMKEHQK FFSVKNPKTG RIEKFITVAN
RETADNGATI LAGNQKVLSA RLADAKFFWE NDLRIAKSEV GVEGWLESLG NVTFHNKLGT
QAARIDRIAA LAREIAPVVG ADADLAEQAA KVAKADLSSE MVYEFPELQG LMGRYYAQAA
GLPQEVANAC ELHYSPLGPS DDVPTEPVSV AVALADKIDT LTGFWAIDEK PTGSKDPYAL
RRAALGVIRL VLSNDVRVGL KEVFAKAYEG ADGSDLLSFF HDRLKVFLRD QGIRHDVIDA
CIAMEGSDDL TLLVKRARAL EDFMKSEDGE NLLQGFKRAN NILSQAEEKD GVEYSFGADK
KFVEDPAEAA LFEALAANEA AISTAIEAED FAAAMGGMAA LRAPVDAFFE AVQVNSDNPV
VRRNRLNLLS QIRKVCGQVA DLSRIEG
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